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1. picard picard Public

   Forked from broadinstitute/picard

   A set of tools (in Java) for working with next generation sequencing data in the BAM (http://samtools.sourceforge.net) format.

   Java

2. CellTypeSpecificEQTLPaper CellTypeSpecificEQTLPaper Public

   Code for the rebuttals for our paper "Cell Specific eQTL Analysis without Sorting Cells"

   Java

3. picardmetrics picardmetrics Public

   Forked from slowkow/picardmetrics

   Run Picard tools and collate multiple metrics files.

   Shell

4. systemsgenetics systemsgenetics Public

   Forked from molgenis/systemsgenetics

   Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool

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5. mlelr mlelr Public

   Forked from czep/mlelr

   A reference implementation of logistic regression in C

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6. 450K_DataProcessing 450K_DataProcessing Public

   Forked from Bonder-MJ/450K_DataProcessing

   Complete pipeline to process Illumina 450K methylation data.

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