v5.25

pauldwolfe released this 24 Nov 18:48

· 923 commits to master since this release

980722e

Features:

Upgrade Virus Interpreter v1.1: https://github.com/hartwigmedical/hmftools/releases/tag/virus-interpreter-v1.1
Upgrade CUPPA to v1.5: https://github.com/hartwigmedical/hmftools/releases/tag/cuppa-v1.5
Upgrade PROTECT to v1.5 and 1.6: https://github.com/hartwigmedical/hmftools/releases/tag/protect-v1.5 https://github.com/hartwigmedical/hmftools/releases/tag/protect-v1.6
Upgrade ORANGE to v1.2-v1.4 https://github.com/hartwigmedical/hmftools/releases/tag/orange-v1.2 https://github.com/hartwigmedical/hmftools/releases/tag/orange-v1.3 https://github.com/hartwigmedical/hmftools/releases/tag/orange-v1.4
Consolidate analysis types into a single event (HMF infrastructure change)
Add disclaimer to CUPPA report output
Support separate cuppa feature plot for ORANGE

Resource Updates:

Updated SERVE resources
Remove germline pathogenic PON entries
Driver Gene Panel updated
Fusion knowledgebase updated

Assets 2