Also fix reverse-compliment and k-nucleotide.

Signed-off-by: Austin Seipp <aseipp@pobox.com>
hferreiro · Jun 25, 2013 · 8122aac · 8122aac
1 parent e4bfef7
commit 8122aac
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diff --git a/shootout/k-nucleotide/Makefile b/shootout/k-nucleotide/Makefile
@@ -14,8 +14,8 @@ HC_OPTS += -O2 -XBangPatterns -package bytestring
 #------------------------------------------------------------------
 # Create input
 
-fasta-c : ../fasta/fasta-c.o
-	gcc $< -o $@
+fasta-c : ../fasta/fasta-c.c
+	$(CC) -std=gnu99 -march=native -O3 -fomit-frame-pointer $< -o $@
 
 knucleotide-input250000.txt : fasta-c
 	./fasta-c $(FAST_OPTS) > $@

diff --git a/shootout/reverse-complement/Makefile b/shootout/reverse-complement/Makefile
@@ -19,8 +19,8 @@ HC_OPTS += -O2 -XBangPatterns -funfolding-use-threshold=32 -XMagicHash \
 #------------------------------------------------------------------
 # Create input
 
-fasta-c : ../fasta/fasta-c.o
-	gcc $< -o $@
+fasta-c : ../fasta/fasta-c.c
+	$(CC) -std=gnu99 -march=native -O3 -fomit-frame-pointer $< -o $@
 
 revcomp-input250000.txt : fasta-c
 	./fasta-c $(FAST_OPTS) > $@