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  1. PacificBiosciences/HiPhase PacificBiosciences/HiPhase Public

    Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads

    Rust 70 4

  2. HudsonAlpha/fmlrc2 HudsonAlpha/fmlrc2 Public

    Rust 43 5

  3. msbwt msbwt Public

    A python toolkit for building and querying multi-string BWTs

    Python 27 7

  4. PacificBiosciences/MethBat PacificBiosciences/MethBat Public

    A battery of methylation tools for PacBio HiFi reads

    28 1

  5. HudsonAlpha/CSL_public_benchmark HudsonAlpha/CSL_public_benchmark Public

    Location of public benchmarking; primarily final results

    Shell 18

  6. PacificBiosciences/pb-StarPhase PacificBiosciences/pb-StarPhase Public

    A phase-aware pharmacogenomic diplotyper for PacBio datasets

    Rust 10 1