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## RuDR-BERT | ||
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EnDR-BERT - Multilingual, Cased, which pretrained on the collecting of consumer comments on drug administration from [2]. Pre-training was based on the [original BERT code](https://github.com/google-research/bert) provided by Google. In particular, Multi-BERT was for used for initialization; vocabulary of Russian subtokens and parameters are the same as in Multi-BERT. Training details are described in our paper. \ | ||
link: https://yadi.sk/d/-PTn0xhk1PqvgQ | ||
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## Citing & Authors | ||
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If you find this repository helpful, feel free to cite our publication: | ||
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[1] Tutubalina E, Alimova I, Miftahutdinov Z, et al. The Russian Drug Reaction Corpus and Neural Models for Drug Reactions and Effectiveness Detection in User Reviews.//Bioinformatics. - 2020. | ||
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preprint: https://arxiv.org/abs/2004.03659 | ||
``` | ||
@article{10.1093/bioinformatics/btaa675, | ||
author = {Tutubalina, Elena and Alimova, Ilseyar and Miftahutdinov, Zulfat and Sakhovskiy, Andrey and Malykh, Valentin and Nikolenko, Sergey}, | ||
title = "{The Russian Drug Reaction Corpus and Neural Models for Drug Reactions and Effectiveness Detection in User Reviews}", | ||
journal = {Bioinformatics}, | ||
year = {2020}, | ||
month = {07}, | ||
issn = {1367-4803}, | ||
doi = {10.1093/bioinformatics/btaa675}, | ||
url = {https://doi.org/10.1093/bioinformatics/btaa675}, | ||
note = {btaa675}, | ||
eprint = {https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btaa675/33539752/btaa675.pdf}, | ||
} | ||
``` | ||
[2] Tutubalina, EV and Miftahutdinov, Z Sh and Nugmanov, RI and Madzhidov, TI and Nikolenko, SI and Alimova, IS and Tropsha, AE Using semantic analysis of texts for the identification of drugs with similar therapeutic effects.//Russian Chemical Bulletin. – 2017. – Т. 66. – №. 11. – С. 2180-2189. | ||
[link to paper](https://www.researchgate.net/profile/Elena_Tutubalina/publication/323751823_Using_semantic_analysis_of_texts_for_the_identification_of_drugs_with_similar_therapeutic_effects/links/5bf7cfc3299bf1a0202cbc1f/Using-semantic-analysis-of-texts-for-the-identification-of-drugs-with-similar-therapeutic-effects.pdf) | ||
``` | ||
@article{tutubalina2017using, | ||
title={Using semantic analysis of texts for the identification of drugs with similar therapeutic effects}, | ||
author={Tutubalina, EV and Miftahutdinov, Z Sh and Nugmanov, RI and Madzhidov, TI and Nikolenko, SI and Alimova, IS and Tropsha, AE}, | ||
journal={Russian Chemical Bulletin}, | ||
volume={66}, | ||
number={11}, | ||
pages={2180--2189}, | ||
year={2017}, | ||
publisher={Springer} | ||
} | ||
``` |