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Rc/3.0.0 #169

Merged
merged 22 commits into from
Jul 19, 2021
Merged

Rc/3.0.0 #169

merged 22 commits into from
Jul 19, 2021

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andricDu
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lepsalex and others added 22 commits January 22, 2021 10:59
* Split mgmt into two profiles, api and execute

* misc clean up

* rename for clarity

* user queue and exchange name to create dl equivalents

* update license blurbs

* timestamp
* fix nextflow monitor and refactor weblogeventsender

* add todo comment for @nonnull removal
…158)

* build instead of jackson convert and more detail in error messaging

* run mvn format
* gatekeeper inital commit

* make gql for gatekeeper more modular

* consume weblog events

* cleanup

* fix field visibility and some other renaming

* check weblog and map to msg

* remove chechandupdateresult

* revert some unneeded changes

* remove local specific nextflow configs

* update compose for gatekeeper

* weblog from gatekeeper streams

* set canceled before check

* fix test, make sure they work without local containers

* replace null return with optional empty

* refactor to make testable and add tests

* disposable manager and remove explicit query

* register others with disposable manager

* add comments for clarity

* execute consumer check if using middleware to initialize

* GqlSearchQueryArgs and more comments

* Move state transition into seperate class for clear documentation. Also add comments to gatekeeperprocessortests.

* add matrix to next state function docs

* Revert "add matrix to next state function docs"

This reverts commit 6694585

* revert

* squash some bugs
* remove api and reorganize packages

* remove postgres from Jenkinsfile

* put back nextflow prop, del streams prop
* explicit json type on params and engineparams

* update config value, stringtype=unspecified
* add health check for disposables

* cleanup WesConsumerConfig and optimize imports

* make requested changes
Replace docker socket mount with docker host env vars.
Set explicit UIDs for containers.
@andricDu andricDu merged commit e8b86bf into master Jul 19, 2021
@andricDu andricDu deleted the rc/3.0.0 branch July 19, 2021 19:55
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3 participants