Add APERIO_JP2000_YCBC as supported compression (#83)

imi-bigpicture · Nov 6, 2024 · 0e6d043 · 0e6d043
1 parent 8030def
commit 0e6d043
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Showing 5 changed files with 16 additions and 5 deletions.
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -7,6 +7,12 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased] -
 
+## [0.13.4] - 2024-11-06
+
+### Fixed
+
+- Added `APERIO_JP2000_YCBC` as supported compression format for svs files.
+
 ## [0.13.3] - 2024-10-10
 
 ### Fixed
@@ -225,7 +231,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 - Initial release of opentile.
 
-[Unreleased]: https://github.com/imi-bigpicture/opentile/compare/v0.13.3..HEAD
+[Unreleased]: https://github.com/imi-bigpicture/opentile/compare/v0.13.4..HEAD
+[0.13.4]: https://github.com/imi-bigpicture/opentile/compare/v0.13.2..v0.13.3
 [0.13.3]: https://github.com/imi-bigpicture/opentile/compare/v0.13.2..v0.13.3
 [0.13.2]: https://github.com/imi-bigpicture/opentile/compare/v0.13.1..v0.13.2
 [0.13.1]: https://github.com/imi-bigpicture/opentile/compare/v0.13.0..v0.13.1

diff --git a/opentile/__init__.py b/opentile/__init__.py
@@ -17,4 +17,4 @@
 from opentile.opentile import OpenTile
 from opentile.metadata import Metadata
 
-__version__ = "0.13.3"
+__version__ = "0.13.4"
diff --git a/opentile/formats/svs/svs_image.py b/opentile/formats/svs/svs_image.py
@@ -224,7 +224,11 @@ def pixel_spacing(self) -> SizeMm:
 
     @property
     def supported_compressions(self) -> Optional[List[COMPRESSION]]:
-        return [COMPRESSION.JPEG, COMPRESSION.APERIO_JP2000_RGB]
+        return [
+            COMPRESSION.JPEG,
+            COMPRESSION.APERIO_JP2000_RGB,
+            COMPRESSION.APERIO_JP2000_YCBC,
+        ]
 
     @property
     def mpp(self) -> SizeMm:

diff --git a/opentile/tiff_image.py b/opentile/tiff_image.py
@@ -60,7 +60,7 @@ def __init__(
             self.supported_compressions is not None
             and page.compression not in self.supported_compressions
         ):
-            raise NotImplementedError(f"Non-supported compression {self.compression}.")
+            raise NotImplementedError(f"Non-supported compression {page.compression}.")
         self._page = page
         self._file = file
         self._add_rgb_colorspace_fix = add_rgb_colorspace_fix

diff --git a/pyproject.toml b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "opentile"
-version = "0.13.3"
+version = "0.13.4"
 description = "Read tiles from wsi-TIFF files"
 authors = ["Erik O Gabrielsson <erik.o.gabrielsson@sectra.com>"]
 license = "Apache-2.0"