Skip to content

sinr vs grid stuff #143

@alexshepard

Description

@alexshepard

evaluate SINR vs GRID approach to geo modeling across a number of different criteria:

  • approach: SINR point-based approach vs the discretized GRID approach
  • datasets: with the SINR dataset and with the 2.17 dataset
  • inputs: with coordinates only, with coords + elevation
  • metrics: prauc on 2.17 taxon range recalls & csvs, and cv task gain with 2.17 CV model

things further down the road I'd like to look at:

  • framework: compare Eli's SINR implementation in PyTorch vs my SINR implementation in TF
  • different inputs, including all bioclim coordinates, just an ocean mask, distance from coastline
  • investigate the differences between different approaches for specific taxa. look beyond aggregate metrics and consider whether different approaches are better or worse for different subcategories of metrics: large or small range species, more or less training data, etc. can we plot this? can we map it?
  • is an ensemble approach helpful? are both approaches learning stuff that the other isn't learning? or is one approach just better.

Metadata

Metadata

Assignees

Labels

No labels
No labels

Type

No type

Projects

Status

Done

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions