Remove lookup-refs

[llrs-roche]

Part of https://github.com/insightsengineering/coredev-tasks/issues/609

From now on, we will provide development dependencies in

Remotes: repo/project@branch

format, so it's explicitly visible in the DESCRIPTION file and can be handled by pak::install, renv::install and remotes::install.

With development dependencies specified in CI Pipelines configuration, this connection was hidden, and it was hard to install the package from the main branch (or any other branch) locally from user's machine.

formatters was the only package on lookup-refs. It is a dependency required at the version available on CRAN or higher.

[github-actions]

Unit Tests Summary

    1 files     28 suites   1m 37s ⏱️
  221 tests   221 ✅ 0 💤 0 ❌
1 588 runs  1 588 ✅ 0 💤 0 ❌

Results for commit b553f2b.

♻️ This comment has been updated with latest results.

[github-actions]

Unit Test Performance Difference

Test Suite	$Status$	Time on main	$±Time$	$±Tests$	$±Skipped$	$±Failures$	$±Errors$
Tabulation framework	💚	$20.71$	$-1.53$	$0$	$0$	$0$	$0$

Results for commit 7d89c6f

♻️ This comment has been updated with latest results.

[shajoezhu]

please don't merge this yet, until discussion resolved in https://github.com/insightsengineering/coredev-tasks/issues/609

[m7pr]

@shajoezhu we provided an explanation for this change in that conversation that you linked.
Remotes will only be a temporary field, and will never be included in a candidate for a release or for a released package.

[m7pr]

@shajoezhu I see a positive review in rtables.officer on a similar PR insightsengineering/rtables.officer#35
does it mean we can also continue on this package and all others formatters//rlistings/tern*/scda.test/tlg-c ?

[shajoezhu]

i m blocking this for now. thanks @m7pr

[shajoezhu]

lgtm! thanks @m7pr

[github-actions]

Code Coverage Summary

Filename                     Stmts    Miss  Cover    Missing
-------------------------  -------  ------  -------  --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R/00tabletrees.R               781      63  91.93%   20, 94, 97, 428, 519-520, 523, 681, 785, 877-878, 980, 983, 985-986, 1004-1007, 1027, 1142-1145, 1243-1248, 1404, 1504-1507, 1573-1576, 1612-1615, 1621-1626, 1677, 1684, 1778, 1886, 1899, 1902-1905, 1908-1911, 1938, 1970-1971
R/as_html.R                    167      25  85.03%   5-10, 77, 149-154, 159-164, 179-183, 270
R/colby_constructors.R         597      26  95.64%   81, 134, 197-200, 267-270, 411, 427, 1181, 1269, 1430, 1469, 1480, 1488, 1491, 1516, 1537, 1683, 1906-1909
R/compare_rtables.R             83      17  79.52%   93-96, 99-102, 115-118, 137, 156-157, 188, 193
R/custom_split_funs.R          265      40  84.91%   127, 132, 138-143, 156, 173-177, 353-358, 375-380, 456, 502, 518-521, 537, 599, 609-610, 612, 624, 668, 693
R/default_split_funs.R         286      22  92.31%   271, 334-337, 348-349, 351, 353, 550-554, 618-621, 684-687
R/format_rcell.R                12       0  100.00%
R/indent.R                      13       2  84.62%   40-41
R/index_footnotes.R             66       0  100.00%
R/make_split_fun.R             138      31  77.54%   22-26, 36-39, 52-55, 58-61, 115, 119, 267, 270-273, 278-281, 295, 366, 375, 377, 379, 430
R/make_subset_expr.R           137      15  89.05%   35, 47-61, 135-142, 178, 267, 271, 280
R/summary.R                    144      38  73.61%   35, 80, 178-220, 269, 315-331, 366, 397
R/tree_accessors.R            1125     141  87.47%   110, 139-140, 264, 284, 310, 333, 363, 381, 400-404, 426, 448-451, 566, 593-594, 880-886, 1030, 1049, 1075, 1127, 1184-1185, 1222, 1257, 1295-1300, 1359, 1433-1437, 1455-1464, 1542, 1662-1665, 1690, 1712-1713, 1723, 1774, 1795-1800, 1821-1826, 1837, 1911, 1952, 2051, 2158, 2171, 2185, 2201, 2210, 2220-2224, 2274-2279, 2482, 2492-2495, 2505, 2530-2533, 2540, 2542-2545, 2667, 2701-2702, 2759, 3064, 3425, 3541, 3575-3600, 3691-3699, 3852, 3926-3932, 4144-4145, 4152, 4155-4158, 4162, 4212, 4273, 4298-4322, 4351
R/tt_afun_utils.R              417      33  92.09%   57, 178, 185, 194-208, 276, 284-285, 503, 511-514, 596-600, 620, 634-636
R/tt_as_df.R                   385      22  94.29%   90-93, 101, 138, 212-215, 366, 431, 451-454, 463, 568, 574, 606, 624, 676
R/tt_compare_tables.R           70       4  94.29%   51, 174, 246, 250
R/tt_compatibility.R           570      70  87.72%   19, 142-143, 186, 191, 319-320, 324-327, 333, 337, 521, 575-578, 615-617, 655, 688, 708, 728-731, 741-744, 789, 806-810, 816-819, 893, 920-923, 932, 994, 1002, 1013-1016, 1127, 1134, 1162-1176, 1207-1208
R/tt_dotabulation.R           1161      95  91.82%   54, 246, 251, 253, 301, 325, 329-332, 364-367, 390, 423-426, 454-457, 552, 690-694, 743, 747, 775-778, 788, 808-812, 819-822, 1082, 1086, 1117, 1220-1223, 1433-1441, 1705-1714, 1796-1799, 1810, 1815, 1820-1821, 1823, 1834, 1839, 1862, 1948-1967
R/tt_export.R                   13       1  92.31%   45
R/tt_from_df.R                  15       0  100.00%
R/tt_paginate.R                513      37  92.79%   74, 122-131, 441, 576-579, 600-604, 749-752, 803-810, 887, 890, 908, 915, 918
R/tt_pos_and_access.R          571      42  92.64%   76, 78-80, 105, 166, 212-216, 258, 507, 509, 517, 523, 537, 547-550, 730, 733, 741-745, 750-753, 780, 833-834, 845, 1007-1008, 1076-1092, 1362, 1437
R/tt_showmethods.R             162      21  87.04%   56, 91-113, 223, 249, 258, 263, 266-270, 359-360
R/tt_sort.R                    101       5  95.05%   245-248, 256
R/tt_toString.R                433      24  94.46%   123, 345, 367, 380, 390, 396, 399, 405-415, 508, 609, 811-836
R/utils.R                       34       7  79.41%   56, 169-174
R/validate_table_struct.R       84      10  88.10%   80-84, 93-94, 140, 149-150
R/Viewer.R                      61       9  85.25%   46, 50, 60-64, 84, 118
TOTAL                         8404     800  90.48%

Diff against main

Filename        Stmts    Miss  Cover
------------  -------  ------  -------
R/tt_as_df.R      +79      +8  -1.14%
TOTAL             +79      +8  -0.01%

Results for commit: b553f2b

Minimum allowed coverage is 80%

♻️ This comment has been updated with latest results