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Releases: jbelyeu/samplot

enable csi indices for annotations

09 Apr 21:33
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v1.1.6

generalized exception handling for tabix

fix bug with matplotlib y-axis scientific notation

07 Apr 22:34
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max coverage

09 Feb 04:17
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new maximum coverage option and some new tests

several additional issues fixed

08 Jan 14:54
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removed insert-size axis labels for coverage-only plots, fixed control-sample selection which was dropping all but three samples, fixed issues with out-of-bounds CIs, and other small bugs fixed.

vcf control fix

07 Jan 02:52
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Fixed bug that truncated listing of control samples

samplot vcf bugfixes

20 Oct 22:11
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fixes issues with plotting CIs and translocations with samplot vcf
added functional tests for above fixes

minor tweak to y-axis height

18 Sep 16:21
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aesthetic modification: when same_yaxis_scales is used, the height of the plot is slightly increased to decrease trimming of the plot

added support for picard-style alignment index names

04 Sep 22:22
0b2e59b
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Previously only supported alignment files with the naming convention {alignment_file}.{bam/cram/sam}.{bai/crai/sai}. Now the pattern {alignment_file}.{bai/crai/sai} is also allowed

plotting speed improvements

10 Aug 21:19
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Added coverage plot downsampling so large regions plot faster. Each plot will now include up to 1000 x-axis points of coverage instead of 1 per base pair
Also added option to not include coverage plot or alter the number of x-axis points in the coverage plot
Threw in a change to allow split-panel variants (translocations) in samplot vcf

added samplot vcf debug option

04 Aug 22:50
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new option to print out the reason for exclusion of excluded variants from VCF