GitHub - jj-umn/galaxy-central: git repo tracking galaxy-central's mercurial repository (https://bitbucket.org/galaxy/galaxy-central)

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 12,328 Commits
config		config
contrib		contrib
cron		cron
database		database
display_applications		display_applications
doc		doc
external_service_types		external_service_types
lib		lib
locale		locale
openid		openid
scripts		scripts
static		static
templates		templates
test-data		test-data
test		test
tool-data		tool-data
tools		tools
.coveragerc		.coveragerc
.hgignore		.hgignore
.hgtags		.hgtags
CITATION		CITATION
LICENSE.txt		LICENSE.txt
README.txt		README.txt
buildbot_setup.sh		buildbot_setup.sh
create_db.sh		create_db.sh
data_manager_conf.xml.sample		data_manager_conf.xml.sample
datatypes_conf.xml.sample		datatypes_conf.xml.sample
demo_sequencer_wsgi.ini.sample		demo_sequencer_wsgi.ini.sample
dist-eggs.ini		dist-eggs.ini
distributed_object_store_conf.xml.sample		distributed_object_store_conf.xml.sample
eggs.ini		eggs.ini
external_service_types_conf.xml.sample		external_service_types_conf.xml.sample
extract_dataset_parts.sh		extract_dataset_parts.sh
install_and_test_tool_shed_repositories.sh		install_and_test_tool_shed_repositories.sh
job_conf.xml.sample_advanced		job_conf.xml.sample_advanced
job_conf.xml.sample_basic		job_conf.xml.sample_basic
manage_db.sh		manage_db.sh
manage_tools.sh		manage_tools.sh
migrated_tools_conf.xml.sample		migrated_tools_conf.xml.sample
object_store_conf.xml.sample		object_store_conf.xml.sample
openid_conf.xml.sample		openid_conf.xml.sample
reports_wsgi.ini.sample		reports_wsgi.ini.sample
run.sh		run.sh
run_demo_sequencer.sh		run_demo_sequencer.sh
run_functional_tests.sh		run_functional_tests.sh
run_galaxy_listener.sh		run_galaxy_listener.sh
run_reports.sh		run_reports.sh
run_tool_shed.sh		run_tool_shed.sh
run_tool_shed_functional_tests.sh		run_tool_shed_functional_tests.sh
run_unit_tests.sh		run_unit_tests.sh
set_metadata.sh		set_metadata.sh
setup_rabbitmq.sh		setup_rabbitmq.sh
shed_data_manager_conf.xml.sample		shed_data_manager_conf.xml.sample
shed_tool_conf.xml.sample		shed_tool_conf.xml.sample
shed_tool_data_table_conf.xml.sample		shed_tool_data_table_conf.xml.sample
tool_conf.xml.main		tool_conf.xml.main
tool_conf.xml.sample		tool_conf.xml.sample
tool_data_table_conf.xml.oldlocstyle		tool_data_table_conf.xml.oldlocstyle
tool_data_table_conf.xml.sample		tool_data_table_conf.xml.sample
tool_list.py		tool_list.py
tool_shed_wsgi.ini.sample		tool_shed_wsgi.ini.sample
tool_sheds_conf.xml.sample		tool_sheds_conf.xml.sample
universe_wsgi.ini.sample		universe_wsgi.ini.sample

Repository files navigation

GALAXY
======
http://galaxyproject.org/

The latest information about Galaxy is always available via the Galaxy
website above.

HOW TO START
============
Galaxy requires Python 2.6 or 2.7. To check your python version, run:

% python -V
Python 2.7.3

Start Galaxy:

% sh run.sh

Once Galaxy completes startup, you should be able to view Galaxy in your
browser at:

http://localhost:8080

You may wish to make changes from the default configuration.  This can be done
in the universe_wsgi.ini file.  Tools are configured in tool_conf.xml.  Details
on adding tools can be found on the Galaxy website (linked above).

Not all dependencies are included for the tools provided in the sample
tool_conf.xml.  A full list of external dependencies is available at:

http://wiki.g2.bx.psu.edu/Admin/Tools/Tool%20Dependencies