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CModel now has predict_scores that returns a sparse representation of Dict[int, float] where the position in the arrays you've loaded correspond to the score.
We also have predict_dense_scores which returns a List[float] with the same semantics. If you have subsampled queries, this may make less sense than the aforementioned method.
We have some better testing covering these features.
Note: trying again because of a glitch in automatic releases ('fix' for #32 insufficient)