ASURAT is a computational pipeline, implemented in the R programming language, for single-cell transcriptomics. Using ASURAT, one can simultaneously perform unsupervised clustering and biological interpretation in terms of cell type, disease, biological process, and signaling pathway activity.
Well-documented vignette and tutorial is available from the following URL:
One can install ASURAT by the following code:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("ASURAT")
One can find ASURAT in the following Bioconductor page:
The latest version is available from the following bioRxiv page: