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CoRC v0.10.0

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@jonasfoe jonasfoe released this 30 Apr 00:43
· 38 commits to master since this release
  • Rebased on COPASI release 4.30 sources.

    Disabled JIT compilation for now as it seems to cause crashes.

  • Implemented the download of COPASI platform specific libraries during package installation.

    This makes getCopasi() obsolete. The function has been deprecated.

    Package installation now requires an internet connection by default, which can be circumvented by providing the correct libraries locally with the COPASI_LIB_PATH environment variable.
    One option to set this variable is with the configure.vars argument of install.packages().

  • Added support for working with weights in experimental data of the parameter estimation task.

    defineExperiments() has new parameters weights and normalize_weights_per_experiment.

  • Fixed a bug in setSpecies() where adjusting species initial concentration in conjunction with species type always defaulted to a initial concentration of 0.

  • Various internal adjustments according to R CMD check notes and warnings.

  • Minor additions for package stability tests.