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Added a long overdue error message to ComBat when the experimental design is confounded #1

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merged 1 commit into from
Dec 4, 2014

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@wevanjohnson wevanjohnson changed the title Added a long overdue error message when the experimental design is confounded Added a long overdue error message to ComBat when the experimental design is confounded Dec 4, 2014
jtleek added a commit that referenced this pull request Dec 4, 2014
Added a long overdue error message to ComBat when the experimental design is confounded
@jtleek jtleek merged commit 21cee1c into jtleek:master Dec 4, 2014
jtleek pushed a commit that referenced this pull request Aug 4, 2015
Brought in changes from jtleek to update my fork
lcolladotor pushed a commit that referenced this pull request Jun 5, 2017
Consists of 2 commits.

Commit information:

Commit id: 21cee1c

    Merge pull request #1 from wevanjohnson/master

    Added a long overdue error message to ComBat when the experimental design is confounded
Committed by: Jeff L.
Author Name: Jeff L.
Commit date: 2014-12-04 10:31:35 -0500
Author date: 2014-12-04 10:31:35 -0500

Commit id: 33a090d

    Added a long overdue error message thelling the user when the experimental design is confounded.

Committed by: wevanjohnson
Author Name: wevanjohnson
Commit date: 2014-12-03 21:31:17 -0500
Author date: 2014-12-03 21:31:17 -0500


git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/sva@97375 bc3139a8-67e5-0310-9ffc-ced21a209358
lcolladotor pushed a commit that referenced this pull request Jun 5, 2017
Commit id: 7fb36db

    Merge pull request #7 from wevanjohnson/master

    Added a mean.only option to ComBat

Commit id: 29446f0

    Added a mean.only option to ComBat to only adjust the mean of the batch effect (default adjusts mean and variance)


Commit id: f677116

    Added a mean.only option to ComBat to only adjust the mean of the batch effect (default adjusts mean and varianceA)


Commit id: 6d5ae07

    Merge pull request #1 from jtleek/master

    Brought in changes from jtleek to update my fork


git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/sva@107119 bc3139a8-67e5-0310-9ffc-ced21a209358
lcolladotor pushed a commit that referenced this pull request Aug 21, 2017
Consists of 2 commits.

Commit information:

Commit id: 21cee1c

    Merge pull request #1 from wevanjohnson/master

    Added a long overdue error message to ComBat when the experimental design is confounded
Committed by: Jeff L.
Author Name: Jeff L.
Commit date: 2014-12-04 10:31:35 -0500
Author date: 2014-12-04 10:31:35 -0500

Commit id: 33a090d

    Added a long overdue error message thelling the user when the experimental design is confounded.

Committed by: wevanjohnson
Author Name: wevanjohnson
Commit date: 2014-12-03 21:31:17 -0500
Author date: 2014-12-03 21:31:17 -0500


git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/sva@97375 bc3139a8-67e5-0310-9ffc-ced21a209358
lcolladotor pushed a commit that referenced this pull request Aug 21, 2017
Commit id: 7fb36db

    Merge pull request #7 from wevanjohnson/master

    Added a mean.only option to ComBat

Commit id: 29446f0

    Added a mean.only option to ComBat to only adjust the mean of the batch effect (default adjusts mean and variance)


Commit id: f677116

    Added a mean.only option to ComBat to only adjust the mean of the batch effect (default adjusts mean and varianceA)


Commit id: 6d5ae07

    Merge pull request #1 from jtleek/master

    Brought in changes from jtleek to update my fork


git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/sva@107119 bc3139a8-67e5-0310-9ffc-ced21a209358
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2 participants