Merge pull request #233 from juaml/fix/htcondor-submit-fix

[BUG]: Jobs fail with new `condor_submit_dag` changes
juaml · Jul 27, 2023 · dc23879 · dc23879
2 parents 550e620 + 98c1c73
commit dc23879
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diff --git a/docs/changes/newsfragments/233.bugfix b/docs/changes/newsfragments/233.bugfix
@@ -0,0 +1 @@
+Adapt ``junifer queue`` to properly use HTCondor >=10.4.0 ``condor_submit_dag`` by `Fede Raimondo`_ and `Synchon Mandal`_
diff --git a/junifer/api/functions.py b/junifer/api/functions.py
@@ -532,10 +532,12 @@ def _queue_condor(
     # Submit job(s)
     if submit is True:
         logger.info("Submitting HTCondor job")
-        subprocess.run(["condor_submit_dag", dag_fname])
+        subprocess.run(
+            ["condor_submit_dag", "-include_env", "HOME", dag_fname]
+        )
         logger.info("HTCondor job submitted")
     else:
-        cmd = f"condor_submit_dag {dag_fname.absolute()!s}"
+        cmd = f"condor_submit_dag -include_env 'HOME' {dag_fname.absolute()!s}"
         logger.info(
             f"HTCondor job files created, to submit the job, run `{cmd}`"
         )
Original file line number	Diff line number	Diff line change
		@@ -0,0 +1 @@
		Adapt ``junifer queue`` to properly use HTCondor >=10.4.0 ``condor_submit_dag`` by `Fede Raimondo`_ and `Synchon Mandal`_