add flake8 workflow

.github/workflows/lint.yaml

@@ -0,0 +1,23 @@
+name: Lintly Flake8
+
+on: [pull_request]
+
+jobs:
+  lint:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v2
+      - name: Set up Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: 3.8
+      - name: Install dependencies
+        run: pip install flake8 lintly
+      - uses: grantmcconnaughey/lintly-flake8-github-action@v1.0
+        with:
+          # The GitHub API token to create reviews with
+          token: ${{ secrets.GITHUB_TOKEN }}
+          # Fail if "new" violations detected or "any", default "new"
+          failIf: new
+          # Additional arguments to pass to flake8, default "." (current directory)
+          args: "--max-line-length=99 --exclude=lib/installed_clients/,lib/kb_uploadmethods/kb_uploadmethodsServer.py --ignore=E305,E265 ."

Makefile

@@ -50,7 +50,7 @@ build-test-script:
 	echo 'export KB_AUTH_TOKEN=`cat /kb/module/work/token`' >> $(TEST_DIR)/$(TEST_SCRIPT_NAME)
 	echo 'export PYTHONPATH=$$script_dir/../$(LIB_DIR):$$PATH:$$PYTHONPATH' >> $(TEST_DIR)/$(TEST_SCRIPT_NAME)
 	echo 'cd $$script_dir/../$(TEST_DIR)' >> $(TEST_DIR)/$(TEST_SCRIPT_NAME)
-	echo 'python -m nose --with-coverage --cover-package=$(SERVICE_CAPS) --cover-html --cover-html-dir=/kb/module/work/test_coverage --nocapture .' >> $(TEST_DIR)/$(TEST_SCRIPT_NAME)
+	echo 'python -m nose --with-coverage --cover-package=$(SERVICE_CAPS) --cover-html --cover-html-dir=/kb/module/work/test_coverage --cover-xml --cover-xml-file=/kb/module/work/test_coverage/coverage.xml --nocapture  --nologcapture $(TARGET_TESTS)' >> $(TEST_DIR)/$(TEST_SCRIPT_NAME)
 	chmod +x $(TEST_DIR)/$(TEST_SCRIPT_NAME)
 
 test:

README.md

@@ -1,6 +1,12 @@
 # kb_uploadmethods 
 
-[![Build Status](https://travis-ci.org/tgu/kb_uploadmethods.svg?branch=master)](https://travis-ci.org/tgu/kb_uploadmethods)  
+## Current Status
+
+| Branch  | Build | Coverage | LGTM Alerts |
+| --- | --- | --- | --- |
+| master  | [![KBase SDK Tests](https://github.com/kbaseapps/kb_uploadmethods/workflows/KBase%20SDK%20Tests/badge.svg)](https://github.com/kbaseapps/kb_uploadmethods/actions?query=workflow%3A%22KBase+SDK+Tests%22)  | [![codecov](https://codecov.io/gh/kbaseapps/kb_uploadmethods/branch/master/graph/badge.svg?token=GXuMPxDUP5)](https://codecov.io/gh/kbaseapps/kb_uploadmethods) | [![Total alerts](https://img.shields.io/lgtm/alerts/g/kbaseapps/kb_uploadmethods.svg?logo=lgtm&logoWidth=18)](https://lgtm.com/projects/g/kbaseapps/kb_uploadmethods/alerts/) |
+
+
 [Release Notes](RELEASE_NOTES.md)
 
 ## Description

codecov.yml

@@ -0,0 +1,5 @@
+ignore:
+  - "lib/installed_clients"
+  - "lib/kb_uploadmethods/kb_uploadmethodsServer.py"
+  - "lib/kb_uploadmethods/authclient.py"
+  - "lib/kb_uploadmethods/baseclient.py"