CH Prediction Website

Overview

This application processes CSV data files, performs predictions using pre-trained models, and ranks the risk scores for various genes.

Docker Image Deployment

Pulling the Docker Image

Pull the latest Docker image from Docker Hub using the following command:

docker pull duct/chprediction:latest

Running the Docker Container

Run the Docker container with the following command:

docker run --rm -p 8180:8180 duct/chprediction:latest

The app will be accessible at http://localhost:8180 on your web browser.

Data requirements

The application requires a CSV file with the following columns:

• id: ID of the participant.
• age: Age of the participant.
• sex: Sex of the participant. Possible values include: M, F.
• race: Race of the participant. Possible values include: White, Black, Asian, Other, Missing.
• smoking_status: Smoking status of the participant. Possible values include: 0 (non-smoker), 1 (smoker).
• anc: Absolute neutrophil count (10^9 cells/L).
• alc: Absolute lymphocyte count (10^9 cells/L).
• amc: Absolute monocyte count (10^9 cells/L).
• hgb: Hemoglobin concentration (g/dL).
• mcv: Mean corpuscular volume (fL).
• rdw: Red blood cell distribution width (%).
• plt: Platelet count (10^9 cells/L).

Contact

For questions or comments, please contact Duc Tran, Armel Batchi-Bouyou, or Kelly L. Bolton.