Updated benchmark

kcleal · Jan 30, 2024 · 33f9517 · 33f9517
1 parent 70f6b80
commit 33f9517
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Showing 13 changed files with 8 additions and 2 deletions.
diff --git a/test/plot.py b/test/plot.py
@@ -88,10 +88,16 @@
 custom_params = {"axes.spines.right": False, "axes.spines.top": False}
 sns.set_theme(style="ticks", rc=custom_params)
 
+palette = sns.color_palette('tab10', n_colors=8)
+colors = {}
+for clr, name in zip(palette, ('gw', 'gw -t4', 'igv', 'igv -t4', 'jb2export', 'samplot', 'bamsnap', 'genomeview')):
+    colors[name] = clr
+
+#
 for item in ['total_time', 'relative_time', 'render', 'relative_render_time', 'total_mem', 'relative_mem']:
     g = sns.catplot(data=df2,
-                     palette="tab10", x='region size (bp)', y=item, hue='name',
-                     kind='point', alpha=0.6)
+                    x='region size (bp)', y=item, hue='name',
+                    kind='point', alpha=0.6, palette=colors)
 
     g.ax.set_xlabel("Region size (bp)", fontsize=14)
     label = list(item.replace('_', ' '))

diff --git a/test/results_lr/benchmark_relative_mem_log.pdf b/test/results_lr/benchmark_relative_mem_log.pdf
diff --git a/test/results_lr/benchmark_relative_render_time_log.pdf b/test/results_lr/benchmark_relative_render_time_log.pdf
diff --git a/test/results_lr/benchmark_relative_time_log.pdf b/test/results_lr/benchmark_relative_time_log.pdf
diff --git a/test/results_lr/benchmark_render_log.pdf b/test/results_lr/benchmark_render_log.pdf
diff --git a/test/results_lr/benchmark_total_mem_log.pdf b/test/results_lr/benchmark_total_mem_log.pdf
diff --git a/test/results_lr/benchmark_total_time_log.pdf b/test/results_lr/benchmark_total_time_log.pdf
diff --git a/test/results_pe/benchmark_relative_mem_log.pdf b/test/results_pe/benchmark_relative_mem_log.pdf
diff --git a/test/results_pe/benchmark_relative_render_time_log.pdf b/test/results_pe/benchmark_relative_render_time_log.pdf
diff --git a/test/results_pe/benchmark_relative_time_log.pdf b/test/results_pe/benchmark_relative_time_log.pdf
diff --git a/test/results_pe/benchmark_render_log.pdf b/test/results_pe/benchmark_render_log.pdf
diff --git a/test/results_pe/benchmark_total_mem_log.pdf b/test/results_pe/benchmark_total_mem_log.pdf
diff --git a/test/results_pe/benchmark_total_time_log.pdf b/test/results_pe/benchmark_total_time_log.pdf