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Collection of useful functions for medical image processing and reconstruction

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khammernik/medutils

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medutils

This repository contains useful functions for medical image processing and reconstruction.

  • io: loadmat function to handle mat files saved with different versions
  • measures: common evaluation measures
  • mri: (centered) fft2 / ifft2, MRI Cartesian 2D operators, post-processing functions, radial and spiral trajectories
  • optimization: Conjugate gradient, primal-dual optimizers for arbitrary operators
  • visualization: slice viewer, contrast enhancement, image brightening, functions to show and save images and k-space data, image flipping

Installation

To install the package, simply execute following commands. All dependencies will be installed automatically.

pip install medutils-mri

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Collection of useful functions for medical image processing and reconstruction

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