update to accommodate differing numbers of stains/channels #39
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- stain_# columns can now be added or removed. - can also use n/a or empty cells to indicate no stain - README is updated - TODO: run a case with single stain to see if any downstream bugs need to be fixed..
- also fixes a type conversion bug in pixel size (fixed also in another branch)..
- can now choose strategy, one_round seems to work best for marm test data
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also exposed more options for bigstitcher steps, in case these are needed to fine-tune performance.. |
BenGros
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May 23, 2024
update to accommodate differing numbers of stains/channels (khanlab#39)
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Closes #38
TODO: