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Fix for dealing with multi-echo EPI BIDS filenames

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@switt4 switt4 released this 24 Jul 18:49
· 171 commits to master since this release

Add scripts to correct filename errors for multi-echo EPI data. Heudiconv randomly assigns echo numbers to BIDS filenames, which do not correspond to the correct EchoNumber in the corresponding .json file. The scripts assign the correct EchoNumber to the correct EPI file and code the echo number in correct BIDS format in the filename.