✅ Add file_type validation tests

tests/data/SD_ME0WME0W/s3_scrape.csv

@@ -0,0 +1,3 @@
+Bucket,Key,Size,ETag
+kf-study-us-east-1-dev-sd-00000000,source/my-file.bam,1234567,33a64df551425fcc55e4d42a148795d9f25f89d4
+kf-study-us-east-1-dev-sd-00000000,source/hg32.fq,83823434,d41d8cd98f00b204e9800998ecf8427e-32

tests/data/SD_ME0WME0W/s3_scrape_extra.csv

@@ -0,0 +1,3 @@
+Bucket,Key,Size,ETag,Participant
+kf-study-us-east-1-dev-sd-00000000,source/my-file.bam,1234567,33a64df551425fcc55e4d42a148795d9f25f89d4,SUBJ1
+kf-study-us-east-1-dev-sd-00000000,source/hg32.fq,83823434,d41d8cd98f00b204e9800998ecf8427e-32,SUBJ2

tests/data/SD_ME0WME0W/s3_scrape_partial.csv

@@ -0,0 +1,3 @@
+Bucket,Key
+kf-study-us-east-1-dev-sd-00000000,source/my-file.bam
+kf-study-us-east-1-dev-sd-00000000,source/hg32.fq

tests/files/test_file_type_validation.py

@@ -0,0 +1,145 @@
+import pytest
+from django.contrib.auth import get_user_model
+from graphql_relay import to_global_id
+
+from creator.studies.factories import StudyFactory
+from creator.studies.models import Study, Membership
+from creator.files.models import Version
+
+from creator.studies.factories import StudyFactory
+from creator.files.factories import FileFactory
+
+User = get_user_model()
+
+
+CREATE_FILE = """
+    mutation (
+        $version: ID!,
+        $name: String!,
+        $description: String!,
+        $fileType: FileFileType!,
+        $study: ID
+        $tags: [String]
+    ) {
+        createFile(
+          version: $version,
+          name: $name,
+          study: $study,
+          description: $description,
+          fileType: $fileType
+          tags: $tags
+        ) {
+            file {
+                id
+                kfId
+                name
+                description
+                fileType
+                tags
+                versions(orderBy: "-created_at") {
+                    edges {
+                        node {
+                            id
+                            analysis {
+                                id
+                            }
+                        }
+                    }
+                }
+            }
+      }
+    }
+"""
+
+
+def test_missing_columns(db, clients, upload_version):
+    """
+    Test that an error outlining missing columns is returned correctly
+    """
+    client = clients.get("Administrators")
+    study = StudyFactory(kf_id="SD_ME0WME0W")
+
+    resp = upload_version(
+        "SD_ME0WME0W/FV_4DP2P2Y2_clinical.csv",
+        study_id=study.kf_id,
+        client=client,
+    )
+    version = resp.json()["data"]["createVersion"]["version"]["id"]
+
+    variables = {
+        "version": version,
+        "name": "Test file",
+        "study": to_global_id("StudyNode", study.kf_id),
+        "description": "This is my test file",
+        "fileType": "S3S",
+        "tags": [],
+    }
+
+    data = {"query": CREATE_FILE, "variables": variables}
+    resp = client.post("/graphql", content_type="application/json", data=data)
+
+    assert "errors" in resp.json()
+    assert "missing columns" in resp.json()["errors"][0]["message"]
+    assert "ETag" in resp.json()["errors"][0]["message"]
+    assert "Key" in resp.json()["errors"][0]["message"]
+
+
+def test_partially_missing_columns(db, clients, upload_version):
+    """
+    Test that an error outlining missing columns is returned correctly
+    """
+    client = clients.get("Administrators")
+    study = StudyFactory(kf_id="SD_ME0WME0W")
+
+    resp = upload_version(
+        "SD_ME0WME0W/s3_scrape_partial.csv",
+        study_id=study.kf_id,
+        client=client,
+    )
+    version = resp.json()["data"]["createVersion"]["version"]["id"]
+
+    variables = {
+        "version": version,
+        "name": "Test file",
+        "study": to_global_id("StudyNode", study.kf_id),
+        "description": "This is my test file",
+        "fileType": "S3S",
+        "tags": [],
+    }
+
+    data = {"query": CREATE_FILE, "variables": variables}
+    resp = client.post("/graphql", content_type="application/json", data=data)
+
+    assert "errors" in resp.json()
+    assert "missing columns" in resp.json()["errors"][0]["message"]
+    assert "ETag" in resp.json()["errors"][0]["message"]
+    assert "Size" in resp.json()["errors"][0]["message"]
+    assert "Bucket" not in resp.json()["errors"][0]["message"]
+    assert "Key" not in resp.json()["errors"][0]["message"]
+
+
+def test_extra_columns(db, clients, upload_version):
+    """
+    Test that an error outlining missing columns is returned correctly
+    """
+    client = clients.get("Administrators")
+    study = StudyFactory(kf_id="SD_ME0WME0W")
+
+    resp = upload_version(
+        "SD_ME0WME0W/s3_scrape_extra.csv", study_id=study.kf_id, client=client
+    )
+    version = resp.json()["data"]["createVersion"]["version"]["id"]
+
+    variables = {
+        "version": version,
+        "name": "Test file",
+        "study": to_global_id("StudyNode", study.kf_id),
+        "description": "This is my test file",
+        "fileType": "S3S",
+        "tags": [],
+    }
+
+    data = {"query": CREATE_FILE, "variables": variables}
+    resp = client.post("/graphql", content_type="application/json", data=data)
+
+    assert "errors" not in resp.json()