added (still experimental) bias correction support to Salmon

kingsfordgroup · Oct 19, 2014 · 354fe63 · 354fe63
1 parent d65c556
commit 354fe63
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/SalmonQuantifyAlignments.cpp b/src/SalmonQuantifyAlignments.cpp
@@ -638,7 +638,7 @@ int salmonAlignmentQuantify(int argc, char* argv[]) {
 
         bfs::path estFilePath = outputDirectory / "quant.sf";
 
-        if (noBiasCorrect) {
+        if (biasCorrect) {
             // First, compute the transcript features in case the user
             // ever wants to bias-correct his / her results
             bfs::path transcriptBiasFile(outputDirectory); transcriptBiasFile /= "bias_feats.txt";