Merge pull request #162 from kircherlab/fix/swapped_barcode_outputs

fix: swapped barcode output files
kircherlab · Jan 7, 2025 · bac8b92 · bac8b92
2 parents 8c29256 + a851ad2
commit bac8b92
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/workflow/scripts/count/merge_replicates_barcode_counts.py b/workflow/scripts/count/merge_replicates_barcode_counts.py
@@ -21,14 +21,14 @@
 )
 @click.option(
     "--output",
-    "output_threshold_file",
+    "output_file",
     required=True,
     type=click.Path(writable=True),
     help="Output file.",
 )
 @click.option(
     "--output-threshold",
-    "output_file",
+    "output_threshold_file",
     required=True,
     type=click.Path(writable=True),
     help="Output file.",