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1. The_m5C-epitranscriptome_of_Thermococcus_kodakarensis The_m5C-epitranscriptome_of_Thermococcus_kodakarensis Public

   The extensive and dynamic m5C-epitranscriptome of Thermococcus kodakarensis is generated by a suite of RNA methyltransferases that support life in the extremes

   Jupyter Notebook

2. SeqFinder SeqFinder Public

   Find sequences at genomic position

   Python

3. pseudoreplicate_alignment_file pseudoreplicate_alignment_file Public

   This python script allows you to randomly split a sequence alignment (sam) file into several smaller file, called pseudoreplicates.

   Python

4. BSfilter BSfilter Public

   Bisulfite-seq noise filter for eliminating reads from fastq files that were incompletely bisulfite deaminated.

   Python

5. fasta_to_dict fasta_to_dict Public

   Python function to convert a fasta file to a python dictionary

   Python

6. Random_Sequence_Generator Random_Sequence_Generator Public

   Generate random DNA sequences with a specified GC content

   Python