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test run docker plot
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ktmeaton committed Oct 9, 2020
1 parent 8c8f503 commit 25fe5ce
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Showing 3 changed files with 2 additions and 12 deletions.
11 changes: 1 addition & 10 deletions .github/workflows/docker.yaml
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Expand Up @@ -35,22 +35,13 @@ jobs:
with:
PREFIX_FILTER: |
workflow/envs/
.github/
FILES: |
Dockerfile
*.yaml
docker.yaml
- name: test
env:
STRATEGY_CONTEXT: ${{ toJson(strategy) }}
run: |
echo ${{ steps.git-diff.outputs.diff }};
#------------------------------------------------------------------------#
# Plot environment
- name: build PLOT docker image
if: contains(${{ steps.git-diff.outputs.diff }}, ".github/workflows/docker.yaml") || contains(${{ steps.git-diff.outputs.diff }}, "workflow/envs/plot/plot.yaml")
if: contains(${{ steps.git-diff.outputs.diff }}, "workflow/envs/plot/plot.yaml") || contains(${{ steps.git-diff.outputs.diff }}, "workflow/envs/plot/Dockerfile")
run:
cd workflow/envs/plot;
docker build --no-cache . -t ktmeaton/plague-phylogeography:plot;
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2 changes: 1 addition & 1 deletion workflow/envs/plot/Dockerfile
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@@ -1,6 +1,6 @@
FROM continuumio/miniconda3
LABEL authors="Katherine Eaton" \
description="Docker image containing dependencies for plague-phylogeography: plot."
description="Docker image containing dependencies for ktmeaton/plague-phylogeography: plot."
COPY plot.yaml /
RUN conda install -c conda-forge mamba; \
mamba env create -f /plot.yaml; \
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1 change: 0 additions & 1 deletion workflow/envs/plot/plot.yaml
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Expand Up @@ -8,4 +8,3 @@ dependencies:
- matplotlib=3.3.2
- pandas=1.1.2
- numpy=1.19.1
# test change

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