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possibly fixed spacing
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ktmeaton committed Sep 24, 2020
1 parent e34cd1b commit a80eac2
Showing 1 changed file with 6 additions and 2 deletions.
8 changes: 6 additions & 2 deletions .github/workflows/install.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -70,7 +70,11 @@ jobs:
shell: bash -l {0}
run:
conda activate default;
snakemake --profile profiles/gh-actions --use-conda --conda-frontend mamba --conda-create-envs-only;
snakemake \
--profile profiles/gh-actions \
--use-conda \
--conda-frontend mamba \
--conda-create-envs-only;
conda deactivate;

# Test pipeline
Expand All @@ -82,6 +86,6 @@ jobs:
--profile profiles/gh-actions \
--use-conda \
--conda-frontend mamba \
--report workflow/report/report.html \
--report workflow/report/report.html \
help;
conda deactivate;

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