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update notebooks and env
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ktmeaton committed Apr 8, 2021
1 parent ea703cb commit ae2e701
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Showing 4 changed files with 1,494 additions and 3,329 deletions.
2 changes: 1 addition & 1 deletion workflow/envs/main/environment.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -62,6 +62,6 @@ dependencies:
- pip=20.2.3
- pip:
- git+https://github.com/ktmeaton/MultiQC.git@snippy
- phylo-treetime==0.8.0
- phylo-treetime==0.8.1
- nextstrain-augur==10.3.0
- bezier==2020.5.19
2 changes: 1 addition & 1 deletion workflow/envs/merge/environment.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -89,7 +89,7 @@ dependencies:
- vcftools=0.1.16
- pip:
- git+https://github.com/ktmeaton/MultiQC.git@snippy
- phylo-treetime==0.8.0
- phylo-treetime==0.8.1
- nextstrain-augur==10.3.0
- bezier==2020.5.19
name: plague-phylogeography
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