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updated cheanged
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panushri25 committed Oct 28, 2023
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# Changelog

## Version - 1.4
- (MAJOR) Bug in chrombpnet modisco_motifs command. seqlets was limited to 50000. If users wanted to change it to 1 million this did not happen.
- Filter peaks at edges for pred_bw command and bias pipleline. So bias evaluation now done on these filtered peaks.
- Preprocessing deafulted to use unix sort. Provided option to switch to bedtools sort.
- Provided option to use filter chromosomes option in preprocessing.

## Version - 1.3 - Inworks - 2022-12-11
- Changed pipelines to use modisco-lite, old modisco will soon be removed
- Added automatic shift scripts to repo and integrated with the pipeline
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