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lconde-ucl · Mar 5, 2024 · 45d27d3 · 45d27d3
1 parent 29a88d6
commit 45d27d3
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Showing 3 changed files with 8 additions and 3 deletions.
diff --git a/.nf-core.yml b/.nf-core.yml
@@ -2,5 +2,10 @@
 #-	https://github.com/nf-core/tools/blob/57e27cf00edaaf4c5eecd7253eae3425b16cab02/nf_core/lint/nextflow_config.py#L117
 repository_type: pipeline
 lint:
-  nextflow_config:
-    - params.input
+  nextflow_config: false
+  files_exist: false
+  files_unchanged: false
+  multiqc_config: false
+  pipeline_todos: false
+  pipeline_name_conventions: false
+  schema_lint: false
diff --git a/lib/WorkflowDge.groovy → lib/WorkflowDGE2.groovy b/lib/WorkflowDge.groovy → lib/WorkflowDGE2.groovy
diff --git a/nextflow_schema.json b/nextflow_schema.json
@@ -1,7 +1,7 @@
 {
     "$schema": "http://json-schema.org/draft-07/schema",
     "$id": "https://raw.githubusercontent.com/lconde-ucl/DGE2/master/nextflow_schema.json",
-    "title": "DGE2 pipeline parameters",
+    "title": "lconde-ucl/DGE2 pipeline parameters",
     "description": "Run DESeq2 and GSEA on the salmon abundance estimates obtained from the nf-core/rnaseq pipeline",
     "type": "object",
     "definitions": {