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Leek group

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  1. recount recount Public

    R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/

    R 40 9

  2. derfinder derfinder Public

    R package for DER Finder, a method for differential expression analysis of RNA-seq data

    R 22 11

  3. postpi postpi Public

    R 22 4

  4. phenopredict phenopredict Public

    Use gene expression to predict phenotype sample information

    R 19 5

  5. networks_correction networks_correction Public

    Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"

    HTML 15 3

  6. recount-website recount-website Public

    Code for the Recount project

    R 11 5

Repositories

Showing 10 of 31 repositories
  • recount Public

    R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/

    leekgroup/recount’s past year of commit activity
    R 40 9 1 0 Updated May 21, 2024
  • derfinderPlot Public

    Plotting functions for derfinder results

    leekgroup/derfinderPlot’s past year of commit activity
    R 2 0 0 0 Updated May 3, 2024
  • derfinderHelper Public

    Helper package for derfinder

    leekgroup/derfinderHelper’s past year of commit activity
    R 0 0 0 0 Updated May 3, 2024
  • derfinderData Public

    Example data used by the derfinder and derfinderData Bioconductor packages

    leekgroup/derfinderData’s past year of commit activity
    R 0 0 0 0 Updated May 3, 2024
  • recount-website Public

    Code for the Recount project

    leekgroup/recount-website’s past year of commit activity
    R 11 MIT 5 2 0 Updated Aug 29, 2023
  • regionReport Public

    Generate HTML report for a set of genomic regions or DESeq2/edgeR results

    leekgroup/regionReport’s past year of commit activity
    R 9 4 1 0 Updated May 7, 2023
  • enrichedRanges Public

    enrichedRanges

    leekgroup/enrichedRanges’s past year of commit activity
    R 2 1 0 0 Updated May 7, 2023
  • postpi Public
    leekgroup/postpi’s past year of commit activity
    R 22 4 0 1 Updated Oct 29, 2021
  • swfdr Public

    Science-wise false discovery rate package

    leekgroup/swfdr’s past year of commit activity
    R 3 3 1 0 Updated Dec 10, 2020
  • derCountSupp Public
    leekgroup/derCountSupp’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Aug 23, 2019
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