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Since from Xiaomi changed the way to show badge by notification from Miui 6.
ShortcutBadger.applyCount will not support Xiaomi devices.
ShortcutBadger.applyCount
If you want to support badges for Xiaomi, you have to send notifications. And use
ShortcutBadger.applyNotification(getApplicationContext(), notification, badgeCount);
to let ShortcutBadger help to update the notification to let Xiaomi recognize the badgeCount.
You can view the example here