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Minimap2-2.23 (r1111)

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@lh3 lh3 released this 18 Nov 22:13
· 114 commits to master since this release

Notable changes:

  • Bugfix: fixed missing alignments around long inversions (#806 and #816).
    This bug affected v2.19 through v2.22.

  • Improvement: avoid extremely long mapping time for pathologic reads with
    highly repeated k-mers not in the reference (#771). Use --q-occ-frac=0
    to disable the new heuristic.

  • Change: use --cap-kalloc=1g by default.

(2.23: 18 November 2021, r1111)