Feat: release 2.8.0 - adds hpc support #71
Workflow file for this run
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| name: CI_tests | |
| on: | |
| pull_request: | |
| types: [review_requested, ready_for_review] | |
| branches: | |
| - main | |
| - dev | |
| paths-ignore: | |
| - 'docs/**' | |
| workflow_dispatch: | |
| permissions: | |
| contents: read | |
| jobs: | |
| Pytest: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.7", "3.9", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| cache-dependency-path: setup.py | |
| - name: Install dependencies | |
| run: | | |
| pip install -e '.[test]' | |
| - name: Run tests | |
| run: | | |
| pytest | |
| job_list: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| cache-dependency-path: setup.py | |
| - name: Install dependencies | |
| run: | | |
| pip install -e . | |
| - name: Run tests | |
| env: | |
| CLOUDOS_TOKEN: ${{ secrets.CLOUDOS_TOKEN }} | |
| CLOUDOS_WORKSPACE_ID: ${{ secrets.CLOUDOS_WORKSPACE_ID }} | |
| CLOUDOS_URL: "https://stg.sdlc.lifebit.ai" | |
| run: | | |
| cloudos job list --cloudos-url $CLOUDOS_URL --apikey $CLOUDOS_TOKEN --workspace-id $CLOUDOS_WORKSPACE_ID | |
| job_run_and_status: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| cache-dependency-path: setup.py | |
| - name: Install dependencies | |
| run: | | |
| pip install -e . | |
| - name: Run tests | |
| env: | |
| CLOUDOS_TOKEN: ${{ secrets.CLOUDOS_TOKEN }} | |
| CLOUDOS_WORKSPACE_ID: ${{ secrets.CLOUDOS_WORKSPACE_ID }} | |
| CLOUDOS_URL: "https://stg.sdlc.lifebit.ai" | |
| PROJECT_NAME: "cloudos-cli-tests" | |
| WORKFLOW: "GH-rnatoy" | |
| JOB_CONFIG: "cloudos/examples/rnatoy.config" | |
| JOB_NAME_BASE: "cloudos-cli-CI-test" | |
| COMMIT_HASH: ${{ github.event.pull_request.head.sha }} | |
| PR_NUMBER: ${{ github.event.number }} | |
| INSTANCE_TYPE: "c5.large" | |
| run: | | |
| JOB_NAME="$JOB_NAME_BASE""|GitHubCommit:""${COMMIT_HASH:0:6}""|PR-NUMBER:""$PR_NUMBER" | |
| cloudos job run --cloudos-url $CLOUDOS_URL --apikey $CLOUDOS_TOKEN --workspace-id $CLOUDOS_WORKSPACE_ID --project-name "$PROJECT_NAME" --workflow-name "$WORKFLOW" --job-config $JOB_CONFIG --job-name "$JOB_NAME" --instance-type $INSTANCE_TYPE --spot 2>&1 | tee out.txt | |
| JOB_ID=$(grep -e "Your assigned job id is:" out.txt | rev | cut -f1 -d " " | rev) | |
| cloudos job status --cloudos-url $CLOUDOS_URL --apikey $CLOUDOS_TOKEN --job-id $JOB_ID | |
| workflow_list: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| cache-dependency-path: setup.py | |
| - name: Install dependencies | |
| run: | | |
| pip install -e . | |
| - name: Run tests | |
| env: | |
| CLOUDOS_TOKEN: ${{ secrets.CLOUDOS_TOKEN }} | |
| CLOUDOS_WORKSPACE_ID: ${{ secrets.CLOUDOS_WORKSPACE_ID }} | |
| CLOUDOS_URL: "https://stg.sdlc.lifebit.ai" | |
| run: | | |
| cloudos workflow list --cloudos-url $CLOUDOS_URL --apikey $CLOUDOS_TOKEN --workspace-id $CLOUDOS_WORKSPACE_ID | |
| cloudos workflow list --cloudos-url $CLOUDOS_URL --apikey $CLOUDOS_TOKEN --workspace-id $CLOUDOS_WORKSPACE_ID --curated | |
| project_list: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| cache-dependency-path: setup.py | |
| - name: Install dependencies | |
| run: | | |
| pip install -e . | |
| - name: Run tests | |
| env: | |
| CLOUDOS_TOKEN: ${{ secrets.CLOUDOS_TOKEN }} | |
| CLOUDOS_WORKSPACE_ID: ${{ secrets.CLOUDOS_WORKSPACE_ID }} | |
| CLOUDOS_URL: "https://stg.sdlc.lifebit.ai" | |
| run: | | |
| cloudos project list --cloudos-url $CLOUDOS_URL --apikey $CLOUDOS_TOKEN --workspace-id $CLOUDOS_WORKSPACE_ID | |
| queue_list: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| cache-dependency-path: setup.py | |
| - name: Install dependencies | |
| run: | | |
| pip install -e . | |
| - name: Run tests | |
| env: | |
| CLOUDOS_TOKEN: ${{ secrets.CLOUDOS_TOKEN }} | |
| CLOUDOS_WORKSPACE_ID: ${{ secrets.CLOUDOS_WORKSPACE_ID }} | |
| CLOUDOS_URL: "https://stg.sdlc.lifebit.ai" | |
| run: | | |
| cloudos queue list --cloudos-url $CLOUDOS_URL --apikey $CLOUDOS_TOKEN --workspace-id $CLOUDOS_WORKSPACE_ID |