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lipid abbrev. update
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dominik-kopczynski committed Apr 22, 2024
1 parent 097c0d8 commit 7ec8245
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions SwissLipids.g4
Original file line number Diff line number Diff line change
Expand Up @@ -91,7 +91,7 @@ fa4_unsorted : fa unsorted_fa_separator fa unsorted_fa_separator fa unsorted_fa_

/* fatty acid rules */
fatty_acid : fa_hg fa_fa | fa_hg headgroup_separator fa_fa | mediator;
fa_hg : 'FA' | 'fatty acid' | 'fatty alcohol' | 'NAE' | 'GP-NAE';
fa_hg : 'FFA' | 'FA' | 'fatty acid' | 'fatty alcohol' | 'NAE' | 'GP-NAE';
fa_fa : ROB fa RCB;


Expand Down Expand Up @@ -160,7 +160,7 @@ pl_four_hg : 'BMP' | 'LBPA' | 'Lysobisphosphatidate' | 'CL' | 'MLCL' | 'DLCL';
/* sphingolipid rules */
sl : sl_hg sl_lcb | sl_hg headgroup_separator sl_lcb | sl_hg lcb_18_1_fa;
sl_hg : sl_hg_names | sl_hg_prefix sl_hg_names | sl_hg_names sl_hg_suffix | sl_hg_prefix sl_hg_names sl_hg_suffix;
sl_hg_names : 'HexCer' | 'Hex2Cer' | 'SM' | 'PE-Cer' | 'Cer' | 'CerP' | 'GD1a' | 'GM1b' | 'GT1b' | 'GQ1b' | 'GT1a' | 'GQ1c' | 'GP1c' | 'GD1c' | 'GD1b' | 'GT1c' | 'IPC' | 'MIPC' | 'M(IP)2C' | 'Gb3Cer' | 'Gb4Cer' | 'Forssman' | 'MSGG' | 'DSGG' | 'NOR1' | 'NORint' | 'NOR2' | 'Globo-H' | 'Globo-A' | 'SB1a' | 'SM1b' | 'SM1a' | 'Branched-Forssman' | 'Globo-B' | 'Para-Forssman' | 'Globo-Lex-9' | glyco_sphingo_lipid;
sl_hg_names : 'HexCer' | 'Hex2Cer' | 'SM' | 'PE-Cer' | 'Cer' | 'CER' | 'CerP' | 'GD1a' | 'GM1b' | 'GT1b' | 'GQ1b' | 'GT1a' | 'GQ1c' | 'GP1c' | 'GD1c' | 'GD1b' | 'GT1c' | 'IPC' | 'MIPC' | 'M(IP)2C' | 'Gb3Cer' | 'Gb4Cer' | 'Forssman' | 'MSGG' | 'DSGG' | 'NOR1' | 'NORint' | 'NOR2' | 'Globo-H' | 'Globo-A' | 'SB1a' | 'SM1b' | 'SM1a' | 'Branched-Forssman' | 'Globo-B' | 'Para-Forssman' | 'Globo-Lex-9' | glyco_sphingo_lipid;
glyco_sphingo_lipid : 'GA1' | 'Ga1' | 'GA2' | 'Ga2' |
'GB3' | 'Gb3' | 'GB4' | 'Gb4' |
'GD1' | 'Gd1' | 'GD2' | 'Gd2' | 'GD3' | 'Gd3' |
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