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linkml · May 9, 2024 · 5c9e936 · 5c9e936
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Showing 12 changed files with 434 additions and 323 deletions.
diff --git a/dev/docs/AnonymousClassExpression/index.html b/dev/docs/AnonymousClassExpression/index.html
@@ -891,6 +891,7 @@ <h3 id="induced">Induced</h3>
     domain_of:
     - definition
     - anonymous_class_expression
+    - permissible_value
     range: definition
   any_of:
     name: any_of

diff --git a/dev/docs/ClassDefinition/index.html b/dev/docs/ClassDefinition/index.html
@@ -1168,13 +1168,15 @@ <h3 id="direct">Direct</h3>
     domain_of:
     - definition
     - anonymous_class_expression
+    - permissible_value
     range: class_definition
   mixins:
     name: mixins
     description: A collection of secondary parent mixin classes from which inheritable
       metaslots are propagated
     domain_of:
     - definition
+    - permissible_value
     range: class_definition
   apply_to:
     name: apply_to
@@ -1234,13 +1236,15 @@ <h3 id="induced">Induced</h3>
     domain_of:
     - definition
     - anonymous_class_expression
+    - permissible_value
     range: class_definition
   mixins:
     name: mixins
     description: A collection of secondary parent mixin classes from which inheritable
       metaslots are propagated
     domain_of:
     - definition
+    - permissible_value
     range: class_definition
   apply_to:
     name: apply_to
@@ -1624,6 +1628,7 @@ <h3 id="induced">Induced</h3>
     domain_of:
     - definition
     - anonymous_class_expression
+    - permissible_value
     range: class_definition
   abstract:
     name: abstract
@@ -1673,6 +1678,7 @@ <h3 id="induced">Induced</h3>
     owner: class_definition
     domain_of:
     - definition
+    - permissible_value
     range: class_definition
   apply_to:
     name: apply_to

diff --git a/dev/docs/Definition/index.html b/dev/docs/Definition/index.html
@@ -1152,6 +1152,7 @@ <h3 id="induced">Induced</h3>
     domain_of:
     - definition
     - anonymous_class_expression
+    - permissible_value
     range: definition
   abstract:
     name: abstract
@@ -1213,6 +1214,7 @@ <h3 id="induced">Induced</h3>
     owner: definition
     domain_of:
     - definition
+    - permissible_value
     range: definition
   apply_to:
     name: apply_to

diff --git a/dev/docs/EnumDefinition/index.html b/dev/docs/EnumDefinition/index.html
@@ -1253,6 +1253,7 @@ <h3 id="induced">Induced</h3>
     domain_of:
     - definition
     - anonymous_class_expression
+    - permissible_value
     range: definition
   abstract:
     name: abstract
@@ -1314,6 +1315,7 @@ <h3 id="induced">Induced</h3>
     owner: enum_definition
     domain_of:
     - definition
+    - permissible_value
     range: definition
   apply_to:
     name: apply_to

diff --git a/dev/docs/PermissibleValue/index.html b/dev/docs/PermissibleValue/index.html
@@ -379,6 +379,10 @@ <h1 id="class-permissiblevalue">Class: PermissibleValue</h1>
 
       PermissibleValue : instantiates
 
+      PermissibleValue : is_a
+
+          PermissibleValue --&gt; permissible_value : is_a
+
       PermissibleValue : keywords
 
       PermissibleValue : last_updated_on
@@ -387,6 +391,10 @@ <h1 id="class-permissiblevalue">Class: PermissibleValue</h1>
 
       PermissibleValue : meaning
 
+      PermissibleValue : mixins
+
+          PermissibleValue --&gt; permissible_value : mixins
+
       PermissibleValue : modified_by
 
       PermissibleValue : narrow_mappings
@@ -471,6 +479,18 @@ <h2 id="slots">Slots</h2>
 <td>direct</td>
 </tr>
 <tr>
+<td><a href="../is_a/">is_a</a></td>
+<td>0..1 <br/> <a href="./">PermissibleValue</a></td>
+<td>A primary parent class or slot from which inheritable metaslots are propagate...</td>
+<td>direct</td>
+</tr>
+<tr>
+<td><a href="../mixins/">mixins</a></td>
+<td>0..* <br/> <a href="./">PermissibleValue</a></td>
+<td>A collection of secondary parent classes or slots from which inheritable meta...</td>
+<td>direct</td>
+</tr>
+<tr>
 <td><a href="../extensions/">extensions</a></td>
 <td>0..* <br/> <a href="../Extension/">Extension</a></td>
 <td>a tag/text tuple attached to an arbitrary element</td>
@@ -717,6 +737,18 @@ <h2 id="usages">Usages</h2>
 <td>domain</td>
 <td><a href="./">PermissibleValue</a></td>
 </tr>
+<tr>
+<td><a href="./">PermissibleValue</a></td>
+<td><a href="../is_a/">is_a</a></td>
+<td>range</td>
+<td><a href="./">PermissibleValue</a></td>
+</tr>
+<tr>
+<td><a href="./">PermissibleValue</a></td>
+<td><a href="../mixins/">mixins</a></td>
+<td>range</td>
+<td><a href="./">PermissibleValue</a></td>
+</tr>
 </tbody>
 </table>
 <h2 id="aliases">Aliases</h2>
@@ -778,12 +810,21 @@ <h3 id="direct">Direct</h3>
 - unit
 - instantiates
 - implements
+- is_a
+- mixins
 slot_usage:
   is_a:
     name: is_a
+    domain_of:
+    - definition
+    - anonymous_class_expression
+    - permissible_value
     range: permissible_value
   mixins:
     name: mixins
+    domain_of:
+    - definition
+    - permissible_value
     range: permissible_value
 
 </code></pre>
@@ -809,9 +850,16 @@ <h3 id="induced">Induced</h3>
 slot_usage:
   is_a:
     name: is_a
+    domain_of:
+    - definition
+    - anonymous_class_expression
+    - permissible_value
     range: permissible_value
   mixins:
     name: mixins
+    domain_of:
+    - definition
+    - permissible_value
     range: permissible_value
 attributes:
   text:
@@ -922,6 +970,38 @@ <h3 id="induced">Induced</h3>
     - element
     - permissible_value
     range: uriorcurie
+  is_a:
+    name: is_a
+    description: A primary parent class or slot from which inheritable metaslots are
+      propagated from. While multiple inheritance is not allowed, mixins can be provided
+      effectively providing the same thing. The semantics are the same when translated
+      to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework
+      (e.g. java classes, python classes) then is a is used. When translating a framework
+      without polymorphism (e.g. json-schema, solr document schema) then is a and
+      mixins are recursively unfolded
+    from_schema: https://w3id.org/linkml/meta
+    rank: 11
+    abstract: true
+    alias: is_a
+    owner: permissible_value
+    domain_of:
+    - definition
+    - anonymous_class_expression
+    - permissible_value
+    range: permissible_value
+  mixins:
+    name: mixins
+    description: A collection of secondary parent classes or slots from which inheritable
+      metaslots are propagated from.
+    from_schema: https://w3id.org/linkml/meta
+    rank: 13
+    multivalued: true
+    alias: mixins
+    owner: permissible_value
+    domain_of:
+    - definition
+    - permissible_value
+    range: permissible_value
   extensions:
     name: extensions
     description: a tag/text tuple attached to an arbitrary element

diff --git a/dev/docs/SlotDefinition/index.html b/dev/docs/SlotDefinition/index.html
@@ -1967,13 +1967,15 @@ <h3 id="direct">Direct</h3>
     domain_of:
     - definition
     - anonymous_class_expression
+    - permissible_value
     range: slot_definition
   mixins:
     name: mixins
     description: A collection of secondary parent mixin slots from which inheritable
       metaslots are propagated
     domain_of:
     - definition
+    - permissible_value
     range: slot_definition
   apply_to:
     name: apply_to
@@ -2027,13 +2029,15 @@ <h3 id="induced">Induced</h3>
     domain_of:
     - definition
     - anonymous_class_expression
+    - permissible_value
     range: slot_definition
   mixins:
     name: mixins
     description: A collection of secondary parent mixin slots from which inheritable
       metaslots are propagated
     domain_of:
     - definition
+    - permissible_value
     range: slot_definition
   apply_to:
     name: apply_to
@@ -3217,6 +3221,7 @@ <h3 id="induced">Induced</h3>
     domain_of:
     - definition
     - anonymous_class_expression
+    - permissible_value
     range: slot_definition
   abstract:
     name: abstract
@@ -3266,6 +3271,7 @@ <h3 id="induced">Induced</h3>
     owner: slot_definition
     domain_of:
     - definition
+    - permissible_value
     range: slot_definition
   apply_to:
     name: apply_to

diff --git a/dev/docs/is_a/index.html b/dev/docs/is_a/index.html
@@ -641,6 +641,11 @@ <h2 id="applicable-classes">Applicable Classes</h2>
 <td>no</td>
 </tr>
 <tr>
+<td><a href="../PermissibleValue/">PermissibleValue</a></td>
+<td>a permissible value, accompanied by intended text and an optional mapping to ...</td>
+<td>yes</td>
+</tr>
+<tr>
 <td><a href="../EnumDefinition/">EnumDefinition</a></td>
 <td>an element whose instances must be drawn from a specified set of permissible ...</td>
 <td>no</td>
@@ -688,6 +693,7 @@ <h2 id="linkml-source">LinkML Source</h2>
 domain_of:
 - definition
 - anonymous_class_expression
+- permissible_value
 range: definition
 
 </code></pre>

diff --git a/dev/docs/mixins/index.html b/dev/docs/mixins/index.html
@@ -657,6 +657,11 @@ <h2 id="applicable-classes">Applicable Classes</h2>
 <td>no</td>
 </tr>
 <tr>
+<td><a href="../PermissibleValue/">PermissibleValue</a></td>
+<td>a permissible value, accompanied by intended text and an optional mapping to ...</td>
+<td>yes</td>
+</tr>
+<tr>
 <td><a href="../EnumDefinition/">EnumDefinition</a></td>
 <td>an element whose instances must be drawn from a specified set of permissible ...</td>
 <td>no</td>
@@ -723,6 +728,7 @@ <h2 id="linkml-source">LinkML Source</h2>
 alias: mixins
 domain_of:
 - definition
+- permissible_value
 range: definition
 
 </code></pre>

diff --git a/dev/linkml_model/model/schema/meta.yaml b/dev/linkml_model/model/schema/meta.yaml
@@ -3104,6 +3104,8 @@ classes:
       - unit
       - instantiates
       - implements
+      - is_a
+      - mixins
     in_subset:
       - SpecificationSubset
       - BasicSubset

diff --git a/dev/search/search_index.json b/dev/search/search_index.json