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Add the capability for assimilating GOES-ABI radiance data #1
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- code has been compiled with RTTOV12.1 - preliminary 3D-Var test w/ WRFDA arctic tutorial case + minimization appears successful + results differ from RTTOV11.3 due to RTTOV updates + quantitative analysis of results has not been performed Changes to be committed: modified: compile modified: var/da/da_radiance/da_get_innov_vector_rttov.inc modified: var/da/da_radiance/da_radiance.f90 modified: var/da/da_radiance/da_rttov.f90 modified: var/da/da_radiance/da_rttov_ad.inc modified: var/da/da_radiance/da_rttov_direct.inc modified: var/da/da_radiance/da_rttov_init.inc modified: var/da/da_radiance/da_rttov_k.inc modified: var/da/da_radiance/da_rttov_tl.inc modified: var/da/da_radiance/module_radiance.f90
Still need to add/fix/improve: + Clear-sky - Cloud detection/mask - QC - Bias Correction + All-sky - Cloud Scattering in RTTOV and CRTM - Symmetric Error - QC - Bias Correction Changes to be committed: modified: ../../Registry/registry.var modified: da_radiance/da_get_satzen.inc new file: da_radiance/da_qc_goesabi.inc modified: da_radiance/da_qc_rad.inc modified: da_radiance/da_radiance.f90 modified: da_radiance/da_radiance1.f90 modified: da_radiance/da_radiance_init.inc new file: da_radiance/da_read_obs_ncgoesabi.inc modified: da_radiance/da_read_obs_ncgoesimg.inc modified: da_radiance/da_setup_radiance_structures.inc modified: da_setup_structures/da_setup_obs_structures.inc modified: da_setup_structures/da_setup_structures.f90 modified: da_tools/da_get_julian_time.inc new file: ../run/radiance_info/goes-16-abi.info new file: ../run/radiance_info/goes-17-abi.info
…/distribution Changes to be committed: modified: var/build/depend.txt modified: var/da/da_radiance/da_radiance.f90 modified: var/da/da_radiance/da_read_obs_ncgoesabi.inc
+moved obs locations for each view to this_obslist linked list +modified da_llxy to allow for determination of "outside" cheaply for large data sets and processor counts
Attempting to balance load by performing round-robin calculation of lat, lon, etc. across more than num_procs tasks For example 10*num_procs tasks, each of which takes a variable amount of time. Each process will complete a different number of tasks, the result of which is assigned to a linked list member. That linked list member includes fields of lat, lon, etc.
…type across processes...
+"outside" test with new da_outside subroutine to generate domainmask_1d and patchmask_1d +lat, lon calculation +zenith angle calculation Changes to be committed: modified: var/build/depend.txt new file: var/da/da_radiance/da_get_satzen_1d.inc modified: var/da/da_radiance/da_radiance.f90 modified: var/da/da_radiance/da_read_obs_ncgoesabi.inc modified: var/da/da_tools/da_llxy.inc new file: var/da/da_tools/da_outside.inc modified: var/da/da_tools/da_tools.f90
+ ll to xy conversion in da_llxy_1d + rad to bt conversion in get_abil1b_bt + replaced loop over mpi_bcast with single mpi_allgatherv Also many code cleanups to remove old implementations Changes to be committed: modified: ../build/depend.txt modified: da_radiance/da_radiance.f90 modified: da_radiance/da_read_obs_ncgoesabi.inc new file: da_tools/da_llxy_1d.inc new file: da_tools/da_llxy_default_1d.inc new file: da_tools/da_llxy_global_1d.inc new file: da_tools/da_llxy_kma_global_1d.inc new file: da_tools/da_llxy_latlon_1d.inc new file: da_tools/da_llxy_lc_1d.inc new file: da_tools/da_llxy_merc_1d.inc new file: da_tools/da_llxy_ps_1d.inc new file: da_tools/da_llxy_rotated_latlon_1d.inc new file: da_tools/da_llxy_wrf_1d.inc new file: da_tools/da_togrid_1d.inc modified: da_tools/da_tools.f90
modified: da_radiance/da_read_obs_ncgoesabi.inc
Changes to be committed: modified: da_radiance/da_read_obs_ncgoesabi.inc
Still required - test compilation - debug runtime errors - test correct functionality for 10 different cloud detection criteria Changes to be committed: modified: Registry/registry.var modified: var/build/depend.txt modified: var/da/da_control/da_control.f90 modified: var/da/da_define_structures/da_define_structures.f90 modified: var/da/da_physics/da_physics.f90 new file: var/da/da_physics/da_trop_wmo.inc modified: var/da/da_radiance/da_allocate_rad_iv.inc modified: var/da/da_radiance/da_crtm.f90 modified: var/da/da_radiance/da_deallocate_radiance.inc modified: var/da/da_radiance/da_get_innov_vector_crtm.inc modified: var/da/da_radiance/da_get_innov_vector_rttov.inc new file: var/da/da_radiance/da_get_sat_angles.inc new file: var/da/da_radiance/da_get_sat_angles_1d.inc deleted: var/da/da_radiance/da_get_satzen.inc deleted: var/da/da_radiance/da_get_satzen_1d.inc new file: var/da/da_radiance/da_get_solar_angles.inc new file: var/da/da_radiance/da_get_solar_angles_1d.inc modified: var/da/da_radiance/da_initialize_rad_iv.inc modified: var/da/da_radiance/da_qc_goesabi.inc modified: var/da/da_radiance/da_radiance.f90 modified: var/da/da_radiance/da_radiance1.f90 modified: var/da/da_radiance/da_read_obs_ncgoesabi.inc modified: var/da/da_radiance/da_read_obs_ncgoesimg.inc modified: var/da/da_radiance/da_rttov.f90
… from the GOES ABI Cloud Mask that were not described in the journal article. Also cleaned up the QC test code. Changes to be committed: modified: da_define_structures/da_define_structures.f90 modified: da_radiance/da_deallocate_radiance.inc modified: da_radiance/da_initialize_rad_iv.inc modified: da_radiance/da_qc_goesabi.inc modified: da_radiance/da_read_obs_ncgoesabi.inc
plus fixes for a) solzen in crtm operator b) i,j,dx,dy,dxm,dym for loc in ABI reading routine Changes to be committed: modified: da_radiance/da_get_innov_vector_crtm.inc modified: da_radiance/da_qc_goesabi.inc modified: da_radiance/da_read_obs_ncgoesabi.inc
Changes to be committed: modified: da_radiance/da_read_obs_ncgoesabi.inc
Changes to be committed: modified: goes-16-abi.info modified: goes-17-abi.info
Changes to be committed: modified: da_radiance/da_qc_goesabi.inc
Changes to be committed: modified: Registry/registry.var modified: var/da/da_define_structures/da_define_structures.f90 modified: var/da/da_monitor/da_rad_diags.f90 modified: var/da/da_radiance/da_allocate_rad_iv.inc modified: var/da/da_radiance/da_crtm.f90 modified: var/da/da_radiance/da_deallocate_radiance.inc modified: var/da/da_radiance/da_get_innov_vector_crtm.inc modified: var/da/da_radiance/da_qc_amsr2.inc modified: var/da/da_radiance/da_qc_goesabi.inc modified: var/da/da_radiance/da_radiance1.f90 modified: var/da/da_radiance/da_radiance_init.inc modified: var/da/da_radiance/da_write_iv_rad_ascii.inc modified: var/da/da_radiance/da_write_oa_rad_ascii.inc modified: var/da/da_radiance/module_radiance.f90 modified: var/run/radiance_info/gcom-w-1-amsr2.info modified: var/run/radiance_info/goes-16-abi.info
Conflicts: var/da/da_radiance/da_get_innov_vector_rttov.inc var/da/da_radiance/da_rttov_init.inc var/da/da_radiance/module_radiance.f90
Changes to be committed: modified: da_radiance/da_get_innov_vector_crtm.inc modified: da_radiance/da_qc_goesabi.inc modified: da_radiance/da_radiance_init.inc modified: da_radiance/da_write_iv_rad_ascii.inc modified: da_radiance/da_write_oa_rad_ascii.inc
This fix ensures that the metadata and grid for CONUS and Full Disk are only allocated and calculated once. Otherwise a run-time error occurs in 4D HofX.
Changes to be committed: modified: da_radiance/da_read_obs_ncgoesabi.inc
… differs between channels
1) QC for missing_r values of bt_p 2) find both link and file types for ABI nc files in any directory with goes-${view}* prefix 3) fix TEMPIR minimum time diff update 4) Handle case when no GOES ABI views have data for any FGAT times 5) Handle case when < 10 channels have low data quality flag (some channels good, some bad) 6) OMB and OMA reading/writing logic for ABI cloudy radiances 7) Set initial goes-16 and goes-17 variances to large values in order to calculate statistics on larger data set 8) Temporary ca_mean and BTlim calculation for gathering cloudy radiance statistics
modified: var/da/da_minimisation/da_calculate_j.inc modified: var/da/da_minimisation/da_sensitivity.inc modified: var/da/da_minimisation/da_transform_vtoy.inc modified: var/da/da_minimisation/da_transform_vtoy_adj.inc
modified: var/da/da_obs/da_transform_xtoy_adj.inc
modified: var/da/da_obs/da_transform_xtoy_adj.inc
modified: var/da/da_obs/da_transform_xtoy_adj.inc modified: var/da/da_radiance/da_allocate_rad_iv.inc modified: var/da/da_radiance/da_crtm.f90 modified: var/da/da_radiance/da_deallocate_radiance.inc modified: var/da/da_radiance/da_get_innov_vector_crtm.inc modified: var/da/da_radiance/da_get_innov_vector_crtmk.inc modified: var/da/da_radiance/da_get_innov_vector_rttov.inc new file: var/da/da_radiance/da_get_satzen.inc modified: var/da/da_radiance/da_initialize_rad_iv.inc modified: var/da/da_radiance/da_qc_amsr2.inc modified: var/da/da_radiance/da_qc_amsub.inc modified: var/da/da_radiance/da_qc_goesimg.inc modified: var/da/da_radiance/da_radiance1.f90 modified: var/da/da_radiance/da_read_obs_ncgoesimg.inc modified: var/da/da_radiance/da_rttov.f90 modified: var/da/da_radiance/da_setup_radiance_structures.inc modified: var/da/da_radiance/da_transform_xtoy_crtm.inc modified: var/da/da_radiance/da_transform_xtoy_crtm_adj.inc modified: var/da/da_radiance/da_write_iv_rad_ascii.inc modified: var/da/da_radiance/da_write_oa_rad_ascii.inc
modified: var/da/da_setup_structures/da_setup_be_regional.inc modified: var/da/da_setup_structures/da_setup_obs_structures.inc
modified: var/da/da_test/da_check_vtox_adjoint.inc modified: var/da/da_test/da_check_vtoy_adjoint.inc modified: var/da/da_test/da_check_xtoy_adjoint.inc modified: var/da/da_test/da_setup_testfield.inc modified: var/da/da_test/da_test_vtoy_transform.inc
modified: var/da/da_radiance/da_read_obs_ncgoesabi.inc
modified: var/da/da_radiance/da_allocate_rad_iv.inc modified: var/da/da_radiance/da_deallocate_radiance.inc modified: var/da/da_radiance/da_initialize_rad_iv.inc modified: var/da/da_radiance/module_radiance.f90 modified: var/run/radiance_info/goes-16-abi.info modified: var/run/radiance_info/goes-17-abi.info
modified: var/da/da_define_structures/da_define_structures.f90 modified: var/da/da_radiance/da_qc_goesabi.inc modified: var/da/da_radiance/da_radiance1.f90 modified: var/da/da_radiance/da_read_obs_ncgoesabi.inc
modified: compile modified: var/da/da_monitor/da_rad_diags.f90 modified: var/da/da_radiance/da_get_innov_vector_crtm.inc modified: var/da/da_radiance/da_get_innov_vector_rttov.inc modified: var/da/da_radiance/da_initialize_rad_iv.inc modified: var/da/da_radiance/da_radiance_init.inc modified: var/da/da_radiance/da_setup_radiance_structures.inc modified: var/da/da_radiance/da_write_iv_rad_ascii.inc modified: var/da/da_radiance/da_write_oa_rad_ascii.inc modified: var/da/da_radiance/module_radiance.f90 modified: var/da/da_setup_structures/da_setup_obs_structures.inc modified: var/da/da_tools/da_tools.f90 modified: var/run/radiance_info/goes-17-abi.info
modified: var/da/da_radiance/da_radiance_init.inc
modified: var/da/da_radiance/da_get_innov_vector_crtm.inc modified: var/da/da_radiance/da_initialize_rad_iv.inc
modified: var/da/da_radiance/da_deallocate_radiance.inc modified: var/da/da_radiance/da_get_innov_vector_crtm.inc modified: var/da/da_radiance/da_radiance_init.inc modified: var/run/VARBC.in
modified: var/da/da_radiance/da_get_innov_vector_crtm.inc modified: var/da/da_radiance/da_initialize_rad_iv.inc modified: var/da/da_radiance/da_read_obs_ncgoesabi.inc
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TYPE: new feature
KEYWORDS: ABI, cloud detection, all-sky obs error model
SOURCE: JJ Guerrette (NCAR/MMM, now at tomorrow.io), Deqin Li (Liaoning Meteorological Bureau of CMA), Jake Liu (NCAR/MMM)
DESCRIPTION OF CHANGES:
This PR addes the assimilation of GOES-16/17 ABI's 3 water vapor channels' radiance data. This includes reading of ABI's full-disk, CONUS, and meso1&2 data files, superobbing and thinning of ABI data, IR-based cloud detection scheme as part of quality control, and all-sky obs error model. Cloud detection scheme should be the same as for AHI in principle, but the actual code implementation is not the same. No attempt made to make ABI's cloud detection code consistent with AHI's when bringing the code originally developed back in 2019-2020 into the latest develop branch. Some technical information is provided below for the use of this new capability.
Raw netcdf ABI data files (one file for one channel) need to be listed in 4 list files:
'file_list_GOES-16-ABI_C' for CONUS scan files
'file_list_GOES-16-ABI_F' for full-disk scan files (e.g., OR_ABI-L1b-RadF-M6C08_G16_s20191211200263_e20191211209571_c20191211210021.nc)
'file_list_GOES-16-ABI_M1' for meso1 scan files
'file_list_GOES-16-ABI_M2' for meso2 scan files
ABI data reading code will automatically determine which file(s) to read in matching ABI file's time and analysis time.
See also AHI DA related PRs:
wrf-model#1139
wrf-model#1173
wrf-model#1774
LIST OF MODIFIED FILES: 41
M Registry/registry.var
M var/build/depend.txt
M var/da/da_define_structures/da_define_structures.f90
M var/da/da_monitor/da_rad_diags.f90
M var/da/da_radiance/da_allocate_rad_iv.inc
M var/da/da_radiance/da_deallocate_radiance.inc
M var/da/da_radiance/da_get_innov_vector_crtm.inc
M var/da/da_radiance/da_get_innov_vector_rttov.inc
A var/da/da_radiance/da_get_sat_angles.inc
A var/da/da_radiance/da_get_sat_angles_1d.inc
A var/da/da_radiance/da_get_solar_angles.inc
A var/da/da_radiance/da_get_solar_angles_1d.inc
M var/da/da_radiance/da_initialize_rad_iv.inc
A var/da/da_radiance/da_qc_goesabi.inc
M var/da/da_radiance/da_qc_rad.inc
M var/da/da_radiance/da_radiance.f90
M var/da/da_radiance/da_radiance1.f90
M var/da/da_radiance/da_radiance_init.inc
A var/da/da_radiance/da_read_obs_ncgoesabi.inc
M var/da/da_radiance/da_rttov.f90
M var/da/da_radiance/da_setup_radiance_structures.inc
M var/da/da_radiance/da_write_iv_rad_ascii.inc
M var/da/da_radiance/da_write_oa_rad_ascii.inc
M var/da/da_radiance/module_radiance.f90
M var/da/da_setup_structures/da_setup_obs_structures.inc
M var/da/da_setup_structures/da_setup_structures.f90
A var/da/da_tools/da_llxy_1d.inc
A var/da/da_tools/da_llxy_default_1d.inc
A var/da/da_tools/da_llxy_global_1d.inc
A var/da/da_tools/da_llxy_kma_global_1d.inc
A var/da/da_tools/da_llxy_latlon_1d.inc
A var/da/da_tools/da_llxy_lc_1d.inc
A var/da/da_tools/da_llxy_merc_1d.inc
A var/da/da_tools/da_llxy_ps_1d.inc
A var/da/da_tools/da_llxy_rotated_latlon_1d.inc
A var/da/da_tools/da_llxy_wrf_1d.inc
A var/da/da_tools/da_togrid_1d.inc
M var/da/da_tools/da_tools.f90
M var/run/VARBC.in
A var/run/radiance_info/goes-16-abi.info
A var/run/radiance_info/goes-17-abi.info
TESTS CONDUCTED:
RELEASE NOTE: Add the capability for assimilating GOES-ABI radiance data