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@jeanlucf22 jeanlucf22 requested a review from oseikuffuor1 July 30, 2024 15:26
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Previously, the wrong eigenvalues (0) were printed out because eigenvalues outside solver were not up-to-date.

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Thanks!

@jeanlucf22 jeanlucf22 merged commit bde8506 into release Jul 30, 2024
@jeanlucf22 jeanlucf22 deleted the mvp_eigenvalues branch July 30, 2024 15:45
jeanlucf22 added a commit that referenced this pull request Aug 14, 2024
* Reenable testShortSighted test (#248)

* Make new driver to check input (#247)

* clean up/reorganize main.cc
* use shared_ptr in class MGmol

* Add possible periodic dimensions to xyz2in.py (#249)

* Add possible periodic dimensions to xyz2in.py

* Remove unused/untested option extrapolateH (#250)

* Exit with failure if density off by more than 2% (#251)

* Exit with failure if density off by more than 2%
* adapt SiH4 test to catch that
* fix bug in DFTsolver that was leading to wrong density

* Example driver (#252)

* add example driver, showing use of MGmol as a force/energy computational engine

* clean up related functions in class Ions

* loadOrbitalsFromRestartFile -> loadRestartFile (#253)

* Add SG15 PBE potential for N (#258)

* Update 2-pyridone example (#259)

* Adjust verbosity in some functions (#260)

* Add new example: pinned H2O (#261)

* Print out eigenvalues out of MVP solver (#262)

Previously, the wrong eigenvalues (0) were printed out because eigenvalues outside solver were not up-to-date.

* Add Li2 example with local GTH potential (#263)

* Fix LBFGS termination when converged (#264)

* Remove unused code to extrapolate rho (#265)

* Fix and test EnergyAndForces interface (#266)

* Atomic potentials were not updated when atomic positions were changed
* Added test to make sure energies and forces are the same after positions
  move by one mesh spacing

* Add new functionality to compute energy and forces (#267)

* use specified initial conditions for wavefunctions

---------

Co-authored-by: Jean-Luc Fattebert <fattebertj@ornl.gov>
Co-authored-by: Kevin" Seung Whan Chung <seung.chung@austin.utexas.edu>
jeanlucf22 added a commit that referenced this pull request Oct 15, 2024
* Reenable testShortSighted test (#248)

* Make new driver to check input (#247)

* clean up/reorganize main.cc
* use shared_ptr in class MGmol

* Add possible periodic dimensions to xyz2in.py (#249)

* Add possible periodic dimensions to xyz2in.py

* Remove unused/untested option extrapolateH (#250)

* Exit with failure if density off by more than 2% (#251)

* Exit with failure if density off by more than 2%
* adapt SiH4 test to catch that
* fix bug in DFTsolver that was leading to wrong density

* Example driver (#252)

* add example driver, showing use of MGmol as a force/energy computational engine

* clean up related functions in class Ions

* loadOrbitalsFromRestartFile -> loadRestartFile (#253)

* Add SG15 PBE potential for N (#258)

* Update 2-pyridone example (#259)

* Adjust verbosity in some functions (#260)

* Add new example: pinned H2O (#261)

* Print out eigenvalues out of MVP solver (#262)

Previously, the wrong eigenvalues (0) were printed out because eigenvalues outside solver were not up-to-date.

* Add Li2 example with local GTH potential (#263)

* Fix LBFGS termination when converged (#264)

* Remove unused code to extrapolate rho (#265)

* Fix and test EnergyAndForces interface (#266)

* Atomic potentials were not updated when atomic positions were changed
* Added test to make sure energies and forces are the same after positions
  move by one mesh spacing

* Add new functionality to compute energy and forces (#267)

* use specified initial conditions for wavefunctions

* Add functionality to compute energy and forces (#270)

* use specified wavefunctions as solution, with unknown DM

* Add ONCV for Sulfur + example (#275)

* Fix CMakeList

* Fix test

* Bypass build error

* Fix merge mistake

---------

Co-authored-by: Jean-Luc Fattebert <fattebertj@ornl.gov>
Co-authored-by: Kevin" Seung Whan Chung <seung.chung@austin.utexas.edu>
jeanlucf22 added a commit that referenced this pull request Oct 15, 2024
* Reenable testShortSighted test (#248)

* Make new driver to check input (#247)

* clean up/reorganize main.cc
* use shared_ptr in class MGmol

* Add possible periodic dimensions to xyz2in.py (#249)

* Add possible periodic dimensions to xyz2in.py

* Remove unused/untested option extrapolateH (#250)

* Exit with failure if density off by more than 2% (#251)

* Exit with failure if density off by more than 2%
* adapt SiH4 test to catch that
* fix bug in DFTsolver that was leading to wrong density

* Example driver (#252)

* add example driver, showing use of MGmol as a force/energy computational engine

* clean up related functions in class Ions

* loadOrbitalsFromRestartFile -> loadRestartFile (#253)

* Add SG15 PBE potential for N (#258)

* Update 2-pyridone example (#259)

* Adjust verbosity in some functions (#260)

* Add new example: pinned H2O (#261)

* Print out eigenvalues out of MVP solver (#262)

Previously, the wrong eigenvalues (0) were printed out because eigenvalues outside solver were not up-to-date.

* Add Li2 example with local GTH potential (#263)

* Fix LBFGS termination when converged (#264)

* Remove unused code to extrapolate rho (#265)

* Fix and test EnergyAndForces interface (#266)

* Atomic potentials were not updated when atomic positions were changed
* Added test to make sure energies and forces are the same after positions
  move by one mesh spacing

* Add new functionality to compute energy and forces (#267)

* use specified initial conditions for wavefunctions

* Add functionality to compute energy and forces (#270)

* use specified wavefunctions as solution, with unknown DM

* Add ONCV for Sulfur + example (#275)

* Fix EnergyAndForces tests (#277)

* have them work in debug mode too

* Move factor 4pi out og linear solvers (#278)

* Move some code into PoissonSolverFactory (#279)

* Clean up class Potentials (#280)

* Clean up class Ions, add test for it (#281)

---------

Co-authored-by: Jean-Luc Fattebert <fattebertj@ornl.gov>
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3 participants