TABIPB

This TABIPB repo serves as a submodule to APBS, and is currently maintained only for compatibility with APBS. The new repository for the treecode-accelerated boundary integral Poisson--Boltzmann solve is located at https://github.com/Treecodes/TABI-PB.

Build Instructions

To build as an independent executable:

mkdir build; cd build
cmake ..
make

This creates a tabipb executable located at tabipb/build/bin/tabipb. To run an example, navigate to the examples directory, and run ../build/bin/tabipb:

cd example/
./../build/bin/tabipb

Building TABIPB on APBS_Sphinx

This should be similar to the Geoflow build. To invoke TABIPB on Sphinx, you need to use the flag -DENABLE_TABIPB_SPHINX=ON when you run cmake. Command:

1. cd APBS_SPHINX/plugins/TABIPB/src
2. mkdir build; cd build
3. cmake -DENABLE_TABIPB_SPHINX=ON ..
4. make
5. cp tabipb_sph.so ../..