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Add example invocation with jostler #385

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merged 1 commit into from
Apr 3, 2023

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stephen-soltesz
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@stephen-soltesz stephen-soltesz commented Mar 31, 2023

This change updates the docker-compose.yaml to run the ndt-server with jostler in a local mode.

This configuration demonstrates:

  • generation of ndt-server result schemas for ndt5 and ndt7 for use by jostler
  • configuration of ndt-server to output results that are jostler/autoloader compatible (i.e. uncompressed json)
  • configuration of jostler using local output mode, simulating upload to GCS bucket with a local directory.

Note: the jostler timeouts and size limits are for illustration purposes only, and not suitable for a production deployment.

This type of configuration could be used by a third-party running the ndt-server with the intent to share the data with M-Lab.


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@stephen-soltesz
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@cristinaleonr FYI.

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Pull Request Test Coverage Report for Build 1655

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage increased (+0.04%) to 81.68%

Totals Coverage Status
Change from base Build 1652: 0.04%
Covered Lines: 1828
Relevant Lines: 2238

💛 - Coveralls

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@robertodauria robertodauria left a comment

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:lgtm:

Reviewed 1 of 1 files at r1, all commit messages.
Reviewable status: :shipit: complete! 1 of 1 approvals obtained

@stephen-soltesz
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Thank you!

@stephen-soltesz stephen-soltesz merged commit 24d6a6f into main Apr 3, 2023
@stephen-soltesz stephen-soltesz deleted the sandbox-soltesz-jostler-example branch April 3, 2023 15:23
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3 participants