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Merge pull request #48 from mach3-software/feature_Expand
Expand (again) Tutorial
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,102 @@ | ||
| #!/bin/bash | ||
|
|
||
| # Check if no arguments are provided | ||
| if [ "$#" -eq 0 ]; then | ||
| echo "[ERROR]: No argument specified, please use --help" | ||
| exit 1 | ||
| fi | ||
|
|
||
| # Display help message | ||
| show_help() { | ||
| echo "Arguments:" | ||
| echo -e "\t --FitterValidations : Integration testing of running MCMC and all plotting scripts" | ||
| echo -e "\t --ReweightValidations : Checking if reweighting works" | ||
| echo -e "\t --CovarianceValidations : Checking if covariances works" | ||
| echo -e "\t --NuMCMCToolsValidations : Checking if interface to NuMCMC Tools works" | ||
| echo -e "\t --all : Run all checks" | ||
| } | ||
|
|
||
| # Run validation functions | ||
| run_reweight_validations() { | ||
| ./CIValidations/SplineValidations | ||
| ./CIValidations/SamplePDFValidations | ||
| ./CIValidations/NuOscillatorInterfaceValidations | ||
| } | ||
|
|
||
| run_fitter_validations() { | ||
| ./CIValidations/FitterValidations | ||
| ./bin/ProcessMCMC bin/TutorialDiagConfig.yaml MCMC_Test.root | ||
| ./bin/DiagMCMC MCMC_Test.root bin/TutorialDiagConfig.yaml | ||
| ./bin/RHat 10 MCMC_Test.root MCMC_Test.root MCMC_Test.root MCMC_Test.root | ||
| ./bin/CombineMaCh3Chains -o MergedChain.root MCMC_Test.root MCMC_Test.root MCMC_Test.root MCMC_Test.root | ||
| ./bin/GetPenaltyTerm MCMC_Test.root bin/TutorialDiagConfig.yaml | ||
| ./bin/MatrixPlotter bin/TutorialDiagConfig.yaml MCMC_Test_drawCorr.root | ||
| ./bin/GetPostfitParamPlots MCMC_Test_drawCorr.root | ||
| ./bin/PlotLLH MCMC_Test.root | ||
| } | ||
|
|
||
| run_covariance_validations() { | ||
| ./CIValidations/CovarianceValidations | ||
| ./CIValidations/MaCh3ModeValidations | ||
| ./CIValidations/UnitTests/manager_tests | ||
| } | ||
|
|
||
| run_nu_mcmc_tools_validations() { | ||
| ./bin/MCMCTutorial Inputs/FitterConfig.yaml | ||
| ./CIValidations/NuMCMCconversion Test.root NewChain.root | ||
| pip install -r NuMCMCTools/requirements.txt | ||
| export PYTHONPATH="$PYTHONPATH:${MaCh3Tutorial_ROOT}/NuMCMCTools" | ||
| cp NewChain.root CIValidations/NewChain.root | ||
| python3 CIValidations/TestNuMCMC.py | ||
| } | ||
|
|
||
| # Parse command-line arguments | ||
| while [[ $# -gt 0 ]]; do | ||
| case $1 in | ||
| -?|--help) | ||
| show_help | ||
| exit 0 | ||
| ;; | ||
| --ReweightValidations) | ||
| RUN_REWEIGHT=true | ||
| ;; | ||
| --FitterValidations) | ||
| RUN_FITTER=true | ||
| ;; | ||
| --CovarianceValidations) | ||
| RUN_COVARIANCE=true | ||
| ;; | ||
| --NuMCMCToolsValidations) | ||
| RUN_NU_MCMC=true | ||
| ;; | ||
| --all) | ||
| RUN_ALL=true | ||
| ;; | ||
| *) | ||
| echo "[ERROR]: Unknown argument '$1'. Use --help for more information." | ||
| exit 1 | ||
| ;; | ||
| esac | ||
| shift | ||
| done | ||
|
|
||
| # Navigate to the MaCh3Tutorial root directory | ||
| cd "${MaCh3Tutorial_ROOT}" || { | ||
| echo "[ERROR]: Could not navigate to MaCh3Tutorial_ROOT directory." | ||
| exit 1 | ||
| } | ||
|
|
||
| # Execute validations based on the arguments | ||
| if [ "$RUN_ALL" = true ]; then | ||
| run_reweight_validations | ||
| run_fitter_validations | ||
| run_covariance_validations | ||
| run_nu_mcmc_tools_validations | ||
| else | ||
| [ "$RUN_REWEIGHT" = true ] && run_reweight_validations | ||
| [ "$RUN_FITTER" = true ] && run_fitter_validations | ||
| [ "$RUN_COVARIANCE" = true ] && run_covariance_validations | ||
| [ "$RUN_NU_MCMC" = true ] && run_nu_mcmc_tools_validations | ||
| fi | ||
|
|
||
| echo "Validation process completed!" |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,17 @@ | ||
| General: | ||
| Verbosity: "NONE" | ||
| CosineZIgnored: true | ||
| CalculationType: "Unbinned" | ||
|
|
||
| OscProbCalcerSetup: | ||
| ImplementationName: "Prob3ppLinear" | ||
| OscChannelMapping: | ||
| - Entry: "Electron:Electron" | ||
| - Entry: "Electron:Muon" | ||
| - Entry: "Electron:Tau" | ||
| - Entry: "Muon:Electron" | ||
| - Entry: "Muon:Muon" | ||
| - Entry: "Muon:Tau" | ||
| - Entry: "Tau:Electron" | ||
| - Entry: "Tau:Muon" | ||
| - Entry: "Tau:Tau" |
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