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clean functions' names #54

clean functions' names

clean functions' names #54

# This workflow will install Python dependencies, run tests and lint with a single version of Python
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: MACS3 CI MacOS 12
on: [push, pull_request]
jobs:
build:
runs-on: macos-12
name: Build on MacOS 12 with Python 3.11
steps:
- name: Checkout MACS
uses: actions/checkout@v3
with:
submodules: 'true'
- name: Cache pip
uses: actions/cache@v3
with:
# This path is specific to Ubuntu
path: ~/.cache/pip
# Look to see if there is a cache hit for the corresponding requirements file
key: ${{ runner.os }}-pip-${{ hashFiles('requirements.txt') }}
restore-keys: |
${{ runner.os }}-pip-
${{ runner.os }}-
- name: Setup venv
run: |
# create venv
python3 -m venv macs3venv
- name: Install dependencies
run: |
# make sure pip is the lastest
source macs3venv/bin/activate
python3 -m pip install --upgrade pip
pip3 install pytest
if [ -f requirements.txt ]; then pip3 install --upgrade -r requirements.txt; fi
- name: Install MACS
run: |
# we use pip install instead of old fashion setup.py install
source macs3venv/bin/activate
pip install .
- name: Test with pytest
run: |
source macs3venv/bin/activate
pytest --runxfail && cd test && ./cmdlinetest-nohmmratac macs3
- name: Build sdist
run: |
source macs3venv/bin/activate
python setup.py sdist
- name: Archive sdist
uses: actions/upload-artifact@v3
with:
name: sdist file
path: |
dist/*.tar.gz