Codon transcoder to obtain ACA-less sequence for Single-Protein-Production system
- Biopython
- Numpy
- Pandas
python spp_transcoder.py [Input, fasta] [Output, fasta]
Example:
python spp_transcoder.py lysozyme.fasta lysozyme_acaless.fasta
The target DNA sequence must begin without shifting of codon-reading frame.