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More details in error message when failing to parse json from a python command's output #5026

More details in error message when failing to parse json from a python command's output

More details in error message when failing to parse json from a python command's output #5026

Workflow file for this run

name: Micromamba
on:
push:
branches:
- main
pull_request:
branches:
- main
paths-ignore:
- 'docs/**'
- 'mamba/**'
- 'libmambapy/**'
- '**.md'
merge_group:
types: [checks_requested]
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
micromamba-static-unix:
name: "${{ matrix.platform }}-${{ matrix.arch }}"
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
include:
- {os: ubuntu-latest, platform: linux, arch: "64"}
- {os: ubuntu-latest, platform: linux, arch: aarch64}
- {os: ubuntu-latest, platform: linux, arch: ppc64le}
- {os: macos-latest, platform: osx, arch: "64"}
- {os: macos-latest, platform: osx, arch: arm64}
steps:
- name: Checkout micromamba-feedstock
uses: actions/checkout@v4
with:
repository: conda-forge/micromamba-feedstock
path: micromamba-feedstock
- name: Disable output validation
if: ${{ matrix.platform == 'osx' }}
run: |
cd micromamba-feedstock/
sed -i '' '/conda_forge_output_validation/d' conda-forge.yml
- name: Checkout mamba branch
uses: actions/checkout@v4
with:
path: mamba
- name: Clear mamba git directory and link source
# `source` subfolder is the special location looked-up by our feedstock.
# Due to Docker, we can only put it as a subfolder of `micromamba-feedstock`,
run: |
rm -rf "mamba/.git"
mv mamba/ micromamba-feedstock/source
# Prevent irrelevant file permission error
git -C micromamba-feedstock/ config --local --add safe.directory '*'
- uses: mamba-org/setup-micromamba@v2
with:
environment-name: mambabuild
create-args: python boa
post-cleanup: none # FIXME the cleanup fails on OSX
- name: Build conda package (Unix native)
if: ${{ !(matrix.platform == 'linux' && matrix.arch != '64') }}
shell: bash -l {0}
run: |
cd micromamba-feedstock/
# Special values for running the feedstock with a local source
export FEEDSTOCK_ROOT="${PWD}"
export CI="local"
# For OSX not using Docker
export CONDA_BLD_PATH="${PWD}/build_artifacts"
mkdir -p "${CONDA_BLD_PATH}"
python build-locally.py "${{ matrix.platform }}_${{ matrix.arch }}_"
# The build_locally.py script will test all Linux builds, which fails outside of linux-64
- name: Build conda package (Linux emulated)
if: ${{ matrix.platform == 'linux' && matrix.arch != '64' }}
uses: uraimo/run-on-arch-action@v2
with:
arch: ${{ matrix.arch }}
distro: ubuntu_latest
dockerRunArgs: -v /var/run/docker.sock:/var/run/docker.sock
install: |
apt-get update -y
apt-get install -y python3 docker.io
run: |
cd micromamba-feedstock/
# Prevent irrelevant file permission error
chown -R $(whoami) .
# Special values for running the feedstock with a local source
export FEEDSTOCK_ROOT="${PWD}"
export CI="local"
python3 build-locally.py "${{ matrix.platform }}_${{ matrix.arch }}_"
- name: Unpack micromamba package
shell: bash -l {0}
run: |
ls micromamba-feedstock/build_artifacts
micromamba package extract \
"micromamba-feedstock/build_artifacts/${{ matrix.platform }}-${{ matrix.arch }}/"micromamba-*.tar.bz2 "pkg/"
mkdir -p "${{ github.workspace }}/artifacts"
cp pkg/bin/micromamba "${{ github.workspace }}/artifacts"
- name: Test basic commands
if: ${{ matrix.arch != 'aarch64' && matrix.arch != 'ppc64le' }}
run: |
mkdir test_prefix
${{ github.workspace }}/artifacts/micromamba --version
${{ github.workspace }}/artifacts/micromamba --help
${{ github.workspace }}/artifacts/micromamba env create -y -n testenv -r ./test_prefix "python<3.13"
${{ github.workspace }}/artifacts/micromamba list -n testenv -r ./test_prefix --log-level 1
- name: Archive conda-build artifact
if: failure()
run: tar -czf ${{ github.workspace }}/micromamba-conda-build-failed-${{ matrix.platform }}-${{ matrix.arch }}.tar.gz $MAMBA_ROOT_PREFIX/envs/mambabuild/conda-bld/micromamba_*
- name: Upload conda build artifacts
uses: actions/upload-artifact@v4
if: failure()
with:
name: micromamba-conda-build-failed-${{ matrix.platform }}-${{ matrix.arch }}
path: ${{ github.workspace }}/micromamba-conda-build-failed-${{ matrix.platform }}-${{ matrix.arch }}.tar.gz
retention-days: 7
- name: Upload micromamba
uses: actions/upload-artifact@v4
with:
name: micromamba-${{ matrix.platform }}-${{ matrix.arch }}
path: ${{ github.workspace }}/artifacts/micromamba
micromamba-static-win:
name: "win-64"
runs-on: windows-2022
steps:
- uses: actions/checkout@v4
- name: Cache vcpkg packages
uses: actions/cache@v4
with:
# The installed packages are in %VCPKG_INSTALLATION_ROOT%\installed\x64-windows-static
# and the info which packages are installed is in %VCPKG_INSTALLATION_ROOT%\installed\vcpkg
path: C:\Users\runneradmin\AppData\Local\vcpkg
key: vcpkg-win-64-appdata
- name: Install dependencies with vcpkg
shell: cmd
# remove libsolv overlay-ports once https://github.com/microsoft/vcpkg/pull/31275 is released
run: |
vcpkg install --triplet x64-windows-static-md
- uses: hendrikmuhs/ccache-action@main
with:
variant: sccache
key: sccache-${{ github.job }}-win-64
- name: Set up MSVC
uses: ilammy/msvc-dev-cmd@v1
- uses: mamba-org/setup-micromamba@v2
with:
environment-name: mambabuild
init-shell: bash cmd.exe
# Constraint on fmt is due to an issue with 11.0.2 (to be fixed in next version)
# cf. https://github.com/fmtlib/fmt/issues/4091
create-args: >-
cli11>=2.2,<3
cpp-expected
nlohmann_json
simdjson-static>=3.3.0
spdlog
fmt<=11.0.1
yaml-cpp-static>=0.8.0
libsolv-static>=0.7.24
reproc-cpp-static>=14.2.4.post0
- name: build micromamba
shell: cmd /C call {0}
run: |
set CMAKE_PREFIX_PATH=.\vcpkg_installed\x64-windows-static-md;%CONDA_PREFIX%\Library
cmake -S . ^
-B build ^
-D CMAKE_CXX_COMPILER_LAUNCHER=sccache ^
-D CMAKE_C_COMPILER_LAUNCHER=sccache ^
-D CMAKE_MSVC_RUNTIME_LIBRARY="MultiThreadedDLL" ^
-D CMAKE_BUILD_TYPE="Release" ^
-D BUILD_LIBMAMBA=ON ^
-D BUILD_STATIC=ON ^
-D BUILD_MICROMAMBA=ON ^
-G "Ninja"
if %errorlevel% neq 0 exit /b %errorlevel%
cmake --build build
if %errorlevel% neq 0 exit /b %errorlevel%
sccache --show-stats
if %errorlevel% neq 0 exit /b %errorlevel%
.\build\micromamba\micromamba.exe --version
if %errorlevel% neq 0 exit /b %errorlevel%
.\build\micromamba\micromamba.exe --help
if %errorlevel% neq 0 exit /b %errorlevel%
- name: build cache statistics
run: sccache --show-stats
- name: Archive-build artifact
if: failure()
run: tar -czf ${{ github.workspace }}/micromamba-build-failed-win-64.tar.gz ${{ github.workspace }}/build/
- name: Test basic commands
run: |
mkdir test_prefix
${{ github.workspace }}/build/micromamba/micromamba.exe --version
${{ github.workspace }}/build/micromamba/micromamba.exe --help
${{ github.workspace }}/build/micromamba/micromamba.exe env create -y -n testenv -r ./test_prefix "python<3.13"
${{ github.workspace }}/build/micromamba/micromamba.exe list -n testenv -r ./test_prefix --log-level 1
- name: Upload build artifacts
uses: actions/upload-artifact@v4
if: failure()
with:
name: micromamba-build-failed-win-64
path: ${{ github.workspace }}/micromamba-build-failed-win-64.tar.gz
retention-days: 7
- uses: actions/upload-artifact@v4
with:
name: micromamba-win-64
path: ${{ github.workspace }}/build/micromamba/micromamba.exe