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[change] update README with numpy and Ipython possible problems
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marta-seq committed Jul 10, 2024
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[![Python Version](https://img.shields.io/badge/Python-3.8%2B-blue.svg)](https://www.python.org/downloads/)
[![Suggestions Welcome](https://img.shields.io/badge/Suggestions-Welcome-brightgreen.svg)](CONTRIBUTING.md)
[![Release](https://img.shields.io/github/v/release/marta-seq/PENGUIN.svg)](https://github.com/marta-seq/PENGUIN/releases/)

# PENGUIN

*PENGUIN* - Percentile Normalization GUI Image deNoising is a
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```bash
conda create --name penguin
conda activate penguin
conda install matplotlib pandas panel numpy opencv scikit-image ipywidgets jupyter ipykernel plotly
conda install matplotlib pandas panel opencv scikit-image ipywidgets jupyter ipykernel plotly
pip install apeer-ometiff-library --no-deps
```

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python -m ipykernel install --user --name=penguin
```
launch the jupyter and be sure that you are running with the penguin kernel
If you have problems with widgets appearing in Jupyter notebook try downgrade Ipython version,
for example:

```bash
python pip install iPython==8.20.0
```

## Getting started

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