replace flake8, isort, pycodestyle with ruff

.github/workflows/testing.yml

@@ -29,8 +29,7 @@ jobs:
  run: |
  pip install pre-commit
  pre-commit run
- 
-
+ 
  test:
  needs: lint
  services:

.pre-commit-config.yaml

@@ -7,7 +7,7 @@ repos:
  rev: v0.0.275
  hooks:
  - id: ruff
- args: [--fix, --ignore, "D,E501"]
+ args: [--fix, --ignore, D]
 
  - repo: https://github.com/psf/black
  rev: 23.3.0

pyproject.toml

@@ -20,7 +20,7 @@ version_scheme = "no-guess-dev"
 line-length = 120
 
 [tool.ruff]
-target-version = "py38"
+target-version = "py37"
 line-length = 120
 select = [
  "B", # flake8-bugbear
@@ -61,10 +61,10 @@ ignore = [
  "D105", # Missing docstring in magic method
  "D205", # 1 blank line required between summary line and description
  "D212", # Multi-line docstring summary should start at the first line
- "FA100", # Missing `from __future__ import annotations`, but uses `typing.XXX`
+ "FA100", # Missing `from __future__ import annotations`, but uses `typing.XXX` TODO
  "PD011", # pandas-use-of-dot-values
  "PD901", # pandas-df-variable-name
- "PT011", # `pytest.raises(XXXError)` is too broad, set the `match` parameter...
+ "PT011", # `pytest.raises(XXXError)` is too broad, set the `match` parameter... TODO
  "PERF203", # try-except-in-loop
  "PERF401", # manual-list-comprehension (TODO fix these or wait for autofix)
  "PLR", # pylint refactor
@@ -82,6 +82,8 @@ isort.split-on-trailing-comma = false
 "tests/*" = ["D"]
 "src/maggma/api/*" = ["B008", "B021", "RET505", "RET506"]
 "tests/api/*" = ["B017", "B018"]
+"src/maggma/cli/*" = ["EXE001"] # triggered by ! at top of file
+"src/maggma/api/utils.py" = ["I001"] # to allow unsorted import block
 
 [tool.pytest.ini_options]
 addopts = "--color=yes -p no:warnings --import-mode=importlib --durations=30"

requirements-testing.txt

@@ -5,10 +5,7 @@ pytest-cov==3.0.0
 pytest-mock==3.10.0
 pytest-xdist==2.5.0
 moto==3.1.17
-pydocstyle==6.1.1
-flake8==4.0.1
-mypy==0.971
-mypy-extensions==0.4.3
+ruff==0.0.280
 responses<0.22.0
 types-PyYAML==6.0.11
 types-setuptools==65.4.0.0

src/maggma/api/resource/__init__.py

@@ -1,10 +1,7 @@
-# isort: off
 from maggma.api.resource.core import Resource
 from maggma.api.resource.core import HintScheme
 from maggma.api.resource.core import HeaderProcessor
 
-# isort: on
-
 from maggma.api.resource.aggregation import AggregationResource
 from maggma.api.resource.post_resource import PostOnlyResource
 from maggma.api.resource.read_resource import ReadOnlyResource, attach_query_ops

src/maggma/api/utils.py

@@ -1,8 +1,14 @@
 import base64
 import inspect
 import sys
-from typing import Any, Callable, Dict, List, Optional, Type
-
+from typing import (
+ Any,
+ Callable,
+ Dict,
+ List,
+ Optional,
+ Type,
+)
 from bson.objectid import ObjectId
 from monty.json import MSONable
 from pydantic import BaseModel
@@ -15,7 +21,6 @@
 else:
  from typing_extensions import get_args # pragma: no cover
 
-
 QUERY_PARAMS = ["criteria", "properties", "skip", "limit"]
 STORE_PARAMS = Dict[
  Literal[