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Use native UPSERTs where possible #4306

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03f2f75
add pg9.5+ upserts
hawkowl Dec 18, 2018
b0c720e
add sqlite 3.24+ upserts
hawkowl Dec 18, 2018
092034a
changelog
hawkowl Dec 18, 2018
82bd14e
refactor feature checking into the engine
hawkowl Dec 18, 2018
43eef60
fixup pep8
hawkowl Dec 18, 2018
e1dd7fe
fixup sqlite3
hawkowl Dec 18, 2018
5c5061e
don't shadow a global import name
hawkowl Dec 18, 2018
5198352
fix up gitignore
hawkowl Dec 18, 2018
6e2e7ff
black
hawkowl Dec 18, 2018
3ac5bcc
try this?
hawkowl Dec 18, 2018
98b00e6
try this?
hawkowl Dec 18, 2018
1e0008b
try this?
hawkowl Dec 18, 2018
faae2e1
test
hawkowl Dec 21, 2018
fd12570
fix
hawkowl Dec 21, 2018
7200d0a
fix for mau?
hawkowl Dec 21, 2018
0e54122
Merge branch 'develop' into hawkowl/upsert-e2e
hawkowl Dec 21, 2018
cb7fe83
Merge remote-tracking branch 'origin/hawkowl/upsert-e2e' into hawkowl…
hawkowl Dec 21, 2018
76bc34a
small fix
hawkowl Dec 21, 2018
f3a0ab8
fix the client ips batch
hawkowl Dec 27, 2018
1b28793
add method to block upserts until we have built indexes
hawkowl Dec 27, 2018
c97601f
redo best effort
hawkowl Dec 27, 2018
02a52c9
cleanups
hawkowl Dec 27, 2018
54a5db3
Merge remote-tracking branch 'origin/develop' into hawkowl/upsert-e2e
hawkowl Dec 27, 2018
6272d0c
respect blocked native upsert
hawkowl Dec 27, 2018
6233abf
respect blocked native upsert
hawkowl Dec 27, 2018
a912b6d
move this so that slaves can safely upsert too
hawkowl Dec 27, 2018
48c351e
fix failing tests
hawkowl Dec 27, 2018
c79058f
fix lint
hawkowl Dec 27, 2018
ee4a0d8
fix failing tests
hawkowl Dec 27, 2018
7df76f7
Update 4306.misc
hawkowl Dec 28, 2018
7a16615
Merge remote-tracking branch 'origin/develop' into hawkowl/upsert-e2e
hawkowl Dec 31, 2018
cd26a90
add some full schemas + docs
hawkowl Jan 3, 2019
a08154a
add the inserts :/
hawkowl Jan 3, 2019
9ead351
clean up packaging
hawkowl Jan 3, 2019
1c9ef51
cleanups
hawkowl Jan 3, 2019
4e66437
cleanups
hawkowl Jan 3, 2019
aebb75a
merge
hawkowl Jan 18, 2019
b6d7fed
things we don't need
hawkowl Jan 18, 2019
238b8d4
things we don't need
hawkowl Jan 18, 2019
078535a
things we don't need
hawkowl Jan 18, 2019
f92a8b3
Merge remote-tracking branch 'origin/develop' into hawkowl/upsert-e2e
hawkowl Jan 18, 2019
9392c55
revert
hawkowl Jan 18, 2019
abf5bd3
Merge remote-tracking branch 'origin/develop' into hawkowl/upsert-e2e
hawkowl Jan 23, 2019
ee92e1a
remove uses where we care about what an upsert returns
hawkowl Jan 23, 2019
b7c3511
Update MANIFEST.in
hawkowl Jan 23, 2019
d53a60b
Update 4306.misc
hawkowl Jan 23, 2019
1b1d782
update due to review
hawkowl Jan 24, 2019
c542f8c
Merge remote-tracking branch 'origin/develop' into hawkowl/upsert-e2e
hawkowl Jan 24, 2019
e2da664
Merge branch 'hawkowl/upsert-e2e' of ssh://github.com/matrix-org/syna…
hawkowl Jan 24, 2019
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6 changes: 1 addition & 5 deletions .coveragerc
Original file line number Diff line number Diff line change
@@ -1,11 +1,7 @@
[run]
branch = True
parallel = True
source = synapse

[paths]
source=
coverage
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include = synapse/*

[report]
precision = 2
6 changes: 3 additions & 3 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -25,9 +25,9 @@ homeserver*.pid
*.tls.dh
*.tls.key

.coverage
.coverage.*
!.coverage.rc
.coverage*
coverage.*
!.coveragerc
htmlcov

demo/*/*.db
Expand Down
1 change: 1 addition & 0 deletions changelog.d/4306.misc
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
Synapse will now take advantage of native UPSERT functionality in PostgreSQL 9.5+ and SQLite 3.24+.
148 changes: 137 additions & 11 deletions synapse/storage/_base.py
Original file line number Diff line number Diff line change
Expand Up @@ -192,6 +192,41 @@ def __init__(self, db_conn, hs):

self.database_engine = hs.database_engine

# A set of tables that are not safe to use native upserts in.
self._unsafe_to_upsert_tables = {"user_ips"}
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if self.database_engine.can_native_upsert:
# Check ASAP (and then later, every 1s) to see if we have finished
# background updates of tables that aren't safe to update.
self._clock.call_later(0.0, self._check_safe_to_upsert)

@defer.inlineCallbacks
def _check_safe_to_upsert(self):
"""
Is it safe to use native UPSERT?

If there are background updates, we will need to wait, as they may be
the addition of indexes that set the UNIQUE constraint that we require.

If the background updates have not completed, wait a second and check again.
"""
updates = yield self._simple_select_list(
"background_updates",
keyvalues=None,
retcols=["update_name"],
desc="check_background_updates",
)
updates = [x["update_name"] for x in updates]

# The User IPs table in schema #53 was missing a unique index, which we
# run as a background update.
if "user_ips_device_unique_index" not in updates:
self._unsafe_to_upsert_tables.discard("user_id")

# If there's any tables left to check, reschedule to run.
if self._unsafe_to_upsert_tables:
self._clock.call_later(1.0, self._check_safe_to_upsert)

def start_profiling(self):
self._previous_loop_ts = self._clock.time_msec()

Expand Down Expand Up @@ -494,8 +529,15 @@ def _simple_insert_many_txn(txn, table, values):
txn.executemany(sql, vals)

@defer.inlineCallbacks
def _simple_upsert(self, table, keyvalues, values,
insertion_values={}, desc="_simple_upsert", lock=True):
def _simple_upsert(
self,
table,
keyvalues,
values,
insertion_values={},
desc="_simple_upsert",
lock=True
):
"""

`lock` should generally be set to True (the default), but can be set
Expand All @@ -516,16 +558,21 @@ def _simple_upsert(self, table, keyvalues, values,
inserting
lock (bool): True to lock the table when doing the upsert.
Returns:
Deferred(bool): True if a new entry was created, False if an
existing one was updated.
Deferred(None or bool): Native upserts always return None. Emulated
upserts return True if a new entry was created, False if an existing
one was updated.
"""
attempts = 0
while True:
try:
result = yield self.runInteraction(
desc,
self._simple_upsert_txn, table, keyvalues, values, insertion_values,
lock=lock
self._simple_upsert_txn,
table,
keyvalues,
values,
insertion_values,
lock=lock,
)
defer.returnValue(result)
except self.database_engine.module.IntegrityError as e:
Expand All @@ -537,12 +584,59 @@ def _simple_upsert(self, table, keyvalues, values,

# presumably we raced with another transaction: let's retry.
logger.warn(
"IntegrityError when upserting into %s; retrying: %s",
table, e
"%s when upserting into %s; retrying: %s", e.__name__, table, e
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)

def _simple_upsert_txn(self, txn, table, keyvalues, values, insertion_values={},
lock=True):
def _simple_upsert_txn(
self,
txn,
table,
keyvalues,
values,
insertion_values={},
lock=True,
):
"""
Pick the UPSERT method which works best on the platform. Either the
native one (Pg9.5+, recent SQLites), or fall back to an emulated method.

Args:
txn: The transaction to use.
table (str): The table to upsert into
keyvalues (dict): The unique key tables and their new values
values (dict): The nonunique columns and their new values
insertion_values (dict): additional key/values to use only when
inserting
lock (bool): True to lock the table when doing the upsert.
Returns:
Deferred(None or bool): Native upserts always return None. Emulated
upserts return True if a new entry was created, False if an existing
one was updated.
"""
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if (
self.database_engine.can_native_upsert
and table not in self._unsafe_to_upsert_tables
):
return self._simple_upsert_txn_native_upsert(
txn,
table,
keyvalues,
values,
insertion_values=insertion_values,
)
else:
return self._simple_upsert_txn_emulated(
txn,
table,
keyvalues,
values,
insertion_values=insertion_values,
lock=lock,
)

def _simple_upsert_txn_emulated(
self, txn, table, keyvalues, values, insertion_values={}, lock=True
):
# We need to lock the table :(, unless we're *really* careful
if lock:
self.database_engine.lock_table(txn, table)
Expand Down Expand Up @@ -577,12 +671,44 @@ def _getwhere(key):
sql = "INSERT INTO %s (%s) VALUES (%s)" % (
table,
", ".join(k for k in allvalues),
", ".join("?" for _ in allvalues)
", ".join("?" for _ in allvalues),
)
txn.execute(sql, list(allvalues.values()))
# successfully inserted
return True

def _simple_upsert_txn_native_upsert(
self, txn, table, keyvalues, values, insertion_values={}
):
"""
Use the native UPSERT functionality in recent PostgreSQL versions.

Args:
table (str): The table to upsert into
keyvalues (dict): The unique key tables and their new values
values (dict): The nonunique columns and their new values
insertion_values (dict): additional key/values to use only when
inserting
Returns:
None
"""
allvalues = {}
allvalues.update(keyvalues)
allvalues.update(values)
allvalues.update(insertion_values)

sql = (
"INSERT INTO %s (%s) VALUES (%s) "
"ON CONFLICT (%s) DO UPDATE SET %s"
) % (
table,
", ".join(k for k in allvalues),
", ".join("?" for _ in allvalues),
", ".join(k for k in keyvalues),
", ".join(k + "=EXCLUDED." + k for k in values),
)
txn.execute(sql, list(allvalues.values()))

def _simple_select_one(self, table, keyvalues, retcols,
allow_none=False, desc="_simple_select_one"):
"""Executes a SELECT query on the named table, which is expected to
Expand Down
5 changes: 4 additions & 1 deletion synapse/storage/client_ips.py
Original file line number Diff line number Diff line change
Expand Up @@ -257,7 +257,10 @@ def update():
)

def _update_client_ips_batch_txn(self, txn, to_update):
self.database_engine.lock_table(txn, "user_ips")
if "user_ips" in self._unsafe_to_upsert_tables or (
not self.database_engine.can_native_upsert
):
self.database_engine.lock_table(txn, "user_ips")

for entry in iteritems(to_update):
(user_id, access_token, ip), (user_agent, device_id, last_seen) = entry
Expand Down
2 changes: 1 addition & 1 deletion synapse/storage/engines/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@

from ._base import IncorrectDatabaseSetup
from .postgres import PostgresEngine
from .sqlite3 import Sqlite3Engine
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from .sqlite import Sqlite3Engine

SUPPORTED_MODULE = {
"sqlite3": Sqlite3Engine,
Expand Down
14 changes: 14 additions & 0 deletions synapse/storage/engines/postgres.py
Original file line number Diff line number Diff line change
Expand Up @@ -38,6 +38,13 @@ def convert_param_style(self, sql):
return sql.replace("?", "%s")

def on_new_connection(self, db_conn):

# Get the version of PostgreSQL that we're using. As per the psycopg2
# docs: The number is formed by converting the major, minor, and
# revision numbers into two-decimal-digit numbers and appending them
# together. For example, version 8.1.5 will be returned as 80105
self._version = db_conn.server_version

db_conn.set_isolation_level(
self.module.extensions.ISOLATION_LEVEL_REPEATABLE_READ
)
Expand All @@ -54,6 +61,13 @@ def on_new_connection(self, db_conn):

cursor.close()

@property
def can_native_upsert(self):
"""
Can we use native UPSERTs? This requires PostgreSQL 9.5+.
"""
return self._version >= 90500
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This is going to blow up if called before on_new_connection. This is probably unlikely, but it may be worth defaulting it to something like 0. Or have a _can_do_native_upsert parameter set to False by default instead, and have on_new_connection update it when its called

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This won't ever be called before we're actually connected, since it's in transaction code?


def is_deadlock(self, error):
if isinstance(error, self.module.DatabaseError):
# https://www.postgresql.org/docs/current/static/errcodes-appendix.html
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,7 @@

import struct
import threading
from sqlite3 import sqlite_version_info

from synapse.storage.prepare_database import prepare_database

Expand All @@ -30,6 +31,14 @@ def __init__(self, database_module, database_config):
self._current_state_group_id = None
self._current_state_group_id_lock = threading.Lock()

@property
def can_native_upsert(self):
"""
Do we support native UPSERTs? This requires SQLite3 3.24+, plus some
more work we haven't done yet to tell what was inserted vs updated.
"""
return sqlite_version_info >= (3, 24, 0)

def check_database(self, txn):
pass

Expand Down
9 changes: 7 additions & 2 deletions synapse/storage/pusher.py
Original file line number Diff line number Diff line change
Expand Up @@ -215,7 +215,7 @@ def add_pusher(self, user_id, access_token, kind, app_id,
with self._pushers_id_gen.get_next() as stream_id:
# no need to lock because `pushers` has a unique key on
# (app_id, pushkey, user_name) so _simple_upsert will retry
newly_inserted = yield self._simple_upsert(
yield self._simple_upsert(
table="pushers",
keyvalues={
"app_id": app_id,
Expand All @@ -238,7 +238,12 @@ def add_pusher(self, user_id, access_token, kind, app_id,
lock=False,
)

if newly_inserted:
user_has_pusher = self.get_if_user_has_pusher.cache.get(
(user_id,), None, update_metrics=False
)

if user_has_pusher is not True:
# invalidate, since we the user might not have had a pusher before
yield self.runInteraction(
"add_pusher",
self._invalidate_cache_and_stream,
Expand Down
55 changes: 40 additions & 15 deletions synapse/storage/user_directory.py
Original file line number Diff line number Diff line change
Expand Up @@ -168,14 +168,14 @@ def _update_profile_in_user_dir_txn(txn):
if isinstance(self.database_engine, PostgresEngine):
# We weight the localpart most highly, then display name and finally
# server name
if new_entry:
if self.database_engine.can_native_upsert:
sql = """
INSERT INTO user_directory_search(user_id, vector)
VALUES (?,
setweight(to_tsvector('english', ?), 'A')
|| setweight(to_tsvector('english', ?), 'D')
|| setweight(to_tsvector('english', COALESCE(?, '')), 'B')
)
) ON CONFLICT (user_id) DO UPDATE SET vector=EXCLUDED.vector
"""
txn.execute(
sql,
Expand All @@ -185,20 +185,45 @@ def _update_profile_in_user_dir_txn(txn):
)
)
else:
sql = """
UPDATE user_directory_search
SET vector = setweight(to_tsvector('english', ?), 'A')
|| setweight(to_tsvector('english', ?), 'D')
|| setweight(to_tsvector('english', COALESCE(?, '')), 'B')
WHERE user_id = ?
"""
txn.execute(
sql,
(
get_localpart_from_id(user_id), get_domain_from_id(user_id),
display_name, user_id,
# TODO: Remove this code after we've bumped the minimum version
# of postgres to always support upserts, so we can get rid of
# `new_entry` usage
if new_entry is True:
sql = """
INSERT INTO user_directory_search(user_id, vector)
VALUES (?,
setweight(to_tsvector('english', ?), 'A')
|| setweight(to_tsvector('english', ?), 'D')
|| setweight(to_tsvector('english', COALESCE(?, '')), 'B')
)
"""
txn.execute(
sql,
(
user_id, get_localpart_from_id(user_id),
get_domain_from_id(user_id), display_name,
)
)
elif new_entry is False:
sql = """
UPDATE user_directory_search
SET vector = setweight(to_tsvector('english', ?), 'A')
|| setweight(to_tsvector('english', ?), 'D')
|| setweight(to_tsvector('english', COALESCE(?, '')), 'B')
WHERE user_id = ?
"""
txn.execute(
sql,
(
get_localpart_from_id(user_id),
get_domain_from_id(user_id),
display_name, user_id,
)
)
else:
raise RuntimeError(
"upsert returned None when 'can_native_upsert' is False"
)
)
elif isinstance(self.database_engine, Sqlite3Engine):
value = "%s %s" % (user_id, display_name,) if display_name else user_id
self._simple_upsert_txn(
Expand Down
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