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test: add subsample kwarg
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maxibor committed Jul 23, 2024
1 parent 77b0f88 commit fd54950
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion tests/test_damage.py
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ def test_al_to_damage(bamfile):
from pydamage.damage import al_to_damage

al = al_to_damage(
reference="NZ_JHCB02000002.1", al_handle=bamfile, wlen=20, g2a=False
reference="NZ_JHCB02000002.1", al_handle=bamfile, wlen=20, g2a=False, subsample=False
)
al.get_damage(show_al=False)

Expand Down Expand Up @@ -75,6 +75,7 @@ def test_test_damage():
bam="tests/data/aligned.bam",
mode="rb",
show_al=False,
subsample=False,
wlen=20,
process=1,
verbose=False,
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