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  • UC San Diego
  • San Diego, CA

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  1. shifting-fitness-landscapes shifting-fitness-landscapes Public

    Competition-driven eco-evolutionary feedback reshapes bacteriophage lambda’s fitness landscape and enables speciation

    Jupyter Notebook

  2. mutational_antigenic_profiling mutational_antigenic_profiling Public

    Computer code for the analyses presented in "Complete mapping of viral escape from neutralizing antibodies" (PLoS Pathog. 2017 Mar 13;13(3):e1006271. doi: 10.1371/journal.ppat.1006271)

    Jupyter Notebook 1

  3. VaccineChecker VaccineChecker Public

    RShiny app checks for common ingredients between vaccines

    R